Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00707 ATGGCTGAAGCCCCGGCGAGCCCCGGTGGAGGGAGCTTCGAAAGCGGCGAACACAGCCCCCGTAATGTTCGCGAGCAGGACAGGTACCTTCCTATTGCGAATATTAGCCGAATCATGAAGAAGGCTCTCCCTGCTAATGGAAAGATCGCCAAGGATGCTAAGGAAACCGTCCAGGAATGTGTCTCGGAATTCATTAGCTTCATCACGAGCGAGGCGAGTGACAAGTGCCAAAGAGAGAAGAGAAAGACGATTAATGGTGACGATTTACTTTGGGCTATGGCAACTTTAGGGTTTGAAGATTATATTGATCCCCTTAAAATTTACCTTGGAAGATACAGAGAGGGATTGTTGACTCGTGTTGTGGCAGATGGAGGGTGA 378 49.21 MAEAPASPGGGSFESGEHSPRNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLGRYREGLLTRVVADGG 125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4554977 4555690 - Bpe015370.1 Bpe04g00707 102516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00707 125 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Bpe04g00707 125 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Bpe04g00707 125 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Bpe04g00707 125 MobiDBLite consensus disorder prediction 1 26 - -
Bpe04g00707 125 Gene3D Histone, subunit A 17 120 IPR009072 GO:0046982
Bpe04g00707 125 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 118 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe04g00707 125 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-8 1 118 - -
Bpe04g00707 125 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe04g00707 125 SUPERFAMILY Histone-fold 26 115 IPR009072 GO:0046982
Bpe04g00707 125 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00707 Bpe-Chr4:4554977 Bpe14g00737 Bpe-Chr14:5698458 2.17E-59 dispersed
Bpe04g00696 Bpe-Chr4:4455196 Bpe04g00707 Bpe-Chr4:4554977 2.89E-84 transposed
Bpe15g01076 Bpe-Chr15:19984528 Bpe04g00707 Bpe-Chr4:4554977 1.00E-50 wgd
Bpe04g00707 Bpe-Chr4:4554977 Bpe04g01683 Bpe-Chr4:22804541 1.03E-66 wgd
Bpe04g00707 Bpe-Chr4:4554977 Bpe04g01866 Bpe-Chr4:23814893 4.33E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21260 PF00808 CBFD_NFYB_HMF 5.30E-28 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00707 K08065 - gmx:100798667 219.164