Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00739 ATGGGAAATCGTATCGGGAAAATCGGCCACTGTTTCGCCGGAGACGGAGATATTTCCAGGCGATATGAAGCCGGAGGCTCTGTGTTCTTACCGGACCCGCTCGACGAGGGTTATGGTCATTCTTTCTGCTACATAAGGCCTGAACCGGAACGGGTATCGTCTTCCCACAAAGTTTTCTCCGAGGATGACATGCCTCCGATGACGACGTTCAGATCAATCTCTGGTGCCTCTGTTAGCGCCAACAACTCCACTCCCCTTTCCACCTCCCTCGCCGATCTTTATCCCTACAGTACGACGTTCGATCGGGCAGCTGCTTTCGATTGTTCAAATTCCTTCGCTTCCATCCCTCTCCAGCCAGTTCCTCGCTATTCAATTTCCGGCAATTCCGTCGGAGTTCTGGGTTCGGGTCCGATCGAGAGAGTGTTTCTTTCGGGTCCTATGGAAAGAAGCTTTACTTCTGGGCCCCTCGATCGCGGGTTAAATTCAGGTTTGATTGCAAAGGGGCTCGATAAACTAGAGAGAAGCTTCTCTCATAATGGATTCGGAGCGAAACCCAGATTAAAGAAGCGCAGTTTAATTCGGATTTTGAAGAGAGCTTTAACAAAAACAATATCTCGGGGCGGCCCAAAACCTCCAATCCTGCCGACGATAGAAATTGATTCAGCTAAACAATCAGATTCATTCAAGGACAACGAAAATTTTGTTGCTCAAAATAGTACCAATATGAGAAGCCATGTGAGCTTAATGGACGACGACGAAGAGGGCGATTACTTAATGGGCAGTAAAACGCTTCAGTGGGCGCAAGGAAAAGCCGGCGAGGATCGAGTTCACGTCGTGATTTCTGAAGAGAACGGCTGGGTTTTTGTCGGAATTTATGACGGATTTAATGGACCAGATGCTCCGGATTATTTACTCGCTAATCTATATACTTCAGTTCGAAAGGAACTCAAGAGATTGATCTGGAATGAAAAGAATGAATCCACTGCTACTTCATCGACATCGATGAATTCGTCAAATTCAAATTCAGCTGAAGAGAATTATACGCCCCAATCGAGTAATGGTAACCCGGATTCGGAAATTGATTCAAACAGGAAAACCAGCGGAATTACGAAGGGCACTGAAATCAATGAAGTGGAGGAGAAATGCGAGGGGAATCCAAAATTTTGTAAGTGCGAATGGGAAAGGGAAAGATTAGAGCACGATACGCGATCAATGTGGGACGAATCATCCGCCATTGGTAAATCTGAAGTTCTGAATGCTCTGTCTCAGGCGTTGAGGAAGACGGAGGATGAGTATTTAGAGATTGCAGATAAGAAGGTAACGGTTCATCCAGAGCTAGCTTTAATGGGGTCATGTGTTTTAGTCATGTTGATGAAGGGAGAAGAAGTTTACGTGATGAACGTCGGAGATAGCCGAGCGGTTCTAGCTCAGCAATTAGAACCGGATTTCTTCGTCGGAAATCCTTACAGAGATTTCGAACGGATCAACGAGGGAACTCAACGATCGATCGAATCACTCGAATCGTGTGGCTTGACTTCGATTCAGCTCACAATGGATCACAGCACAGACGTTGAAGAATTACAGGAAGTGAAGCGGATAAAGAAGGAACACCCGGATGATGCTTGTGCAGTAATGAACGACAGAGTAAAAGGGTATTTGAAGATCACAAGAGCCTTCGGAGCTGGGTTTCTCAAACAGCCAAAGTGGAACGATGCTCTTTTGGAGATGTTCAGAATAGACTACATCGGAAACTCCCCTTACCTAACCTGCAATCCATCGCTCTATCACTACAAACTGAAGCCAAGAGACAGATTCATAATCCTATCCTCCGATGGCCTCTTCCAATACTTCACCAACGAACAAGCAATCGCCGAGGTCGAGGCCTTCCTCACTGCATTTCCTGAAGGCGATCCCGCTCAGCACCTCATCGAAGCTGTTTTGTCCAGAGCAGCTCGAAAAGCCGGTATGGACTTCCATGAACTGCTCGATATCCCGCAAGGCGAGAGGCGGAAATATCACGATGACGTTTCTGTCATCATCATATCTTTGGAGGGACGACTATGGCGGTCTCTACTGTAA 2079 46.71 MGNRIGKIGHCFAGDGDISRRYEAGGSVFLPDPLDEGYGHSFCYIRPEPERVSSSHKVFSEDDMPPMTTFRSISGASVSANNSTPLSTSLADLYPYSTTFDRAAAFDCSNSFASIPLQPVPRYSISGNSVGVLGSGPIERVFLSGPMERSFTSGPLDRGLNSGLIAKGLDKLERSFSHNGFGAKPRLKKRSLIRILKRALTKTISRGGPKPPILPTIEIDSAKQSDSFKDNENFVAQNSTNMRSHVSLMDDDEEGDYLMGSKTLQWAQGKAGEDRVHVVISEENGWVFVGIYDGFNGPDAPDYLLANLYTSVRKELKRLIWNEKNESTATSSTSMNSSNSNSAEENYTPQSSNGNPDSEIDSNRKTSGITKGTEINEVEEKCEGNPKFCKCEWERERLEHDTRSMWDESSAIGKSEVLNALSQALRKTEDEYLEIADKKVTVHPELALMGSCVLVMLMKGEEVYVMNVGDSRAVLAQQLEPDFFVGNPYRDFERINEGTQRSIESLESCGLTSIQLTMDHSTDVEELQEVKRIKKEHPDDACAVMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYIGNSPYLTCNPSLYHYKLKPRDRFIILSSDGLFQYFTNEQAIAEVEAFLTAFPEGDPAQHLIEAVLSRAARKAGMDFHELLDIPQGERRKYHDDVSVIIISLEGRLWRSLL 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4735831 4738281 - Bpe015401.1 Bpe04g00739 102548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00739 692 MobiDBLite consensus disorder prediction 326 372 - -
Bpe04g00739 692 Gene3D - 226 688 IPR036457 -
Bpe04g00739 692 SMART PP2C_4 246 681 IPR001932 -
Bpe04g00739 692 ProSiteProfiles PPM-type phosphatase domain profile. 258 683 IPR001932 -
Bpe04g00739 692 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 17 690 - -
Bpe04g00739 692 Coils Coil 418 438 - -
Bpe04g00739 692 CDD PP2Cc 395 683 IPR001932 -
Bpe04g00739 692 PANTHER PROTEIN PHOSPHATASE 2C 17 690 IPR015655 GO:0004722|GO:0006470
Bpe04g00739 692 Pfam Protein phosphatase 2C 359 632 IPR001932 -
Bpe04g00739 692 SUPERFAMILY PP2C-like 269 684 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00739 Bpe-Chr4:4735831 Bpe07g00222 Bpe-Chr7:1564661 4.88E-134 dispersed
Bpe13g00662 Bpe-Chr13:13416297 Bpe04g00739 Bpe-Chr4:4735831 2.69E-13 transposed
Bpe14g00836 Bpe-Chr14:6277951 Bpe04g00739 Bpe-Chr4:4735831 4.65E-75 transposed
Bpe01g00133 Bpe-Chr1:781777 Bpe04g00739 Bpe-Chr4:4735831 0 wgd
Bpe04g00739 Bpe-Chr4:4735831 Bpe08g00104 Bpe-Chr8:562872 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00739 - - bhj:120069881 853.588