Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00743 ATGGGCGCCGTGACTTTGCTCTGCTTTGTTTCACTAGTGTTGCTGTTGGCGTTGGTCGATGCTAGAATCCCCGGAGTTTACTCCGGTGGTGCATGGGAGGGCGCACACGCTACTTTCTACGGCGGAAGTGACGCCTCCGGAACAATGGGCGGTGCTTGTGGGTATGGAAACCTGTACAGTCAAGGCTACGGAGTAAACACTGCGGCACTGAGCACTGCTCTTTTCAACAGCGGGCTTAGTTGCGGTGCCTGCTTTGAGATTAAGTGCGCCGACGACCCAAAATGGTGTCACCCGGGCAACCCTTCCATCTTCATCACCGCCACCAATTTCTGCCCTCCAAACTTCGCTCTACCTAACGACAATGGCGGCTGGTGCAACCCTCCCCGTCCCCATTTCGACCTCGCCATGCCTATGTTCCTCAAGATCGCCGAGTACCGCGCAGGAATAGTGCCTGTTTCCTTCCGCCGGGTGGCATGCAGAAAGGCAGGGGGGATCAGGTTCACGATCAACGGCTTCCGTTACTTCAACCTGGTTCTGATCACAAACGTCGCGGGTGCAGGTGATATCGTGCGCGTCAGCGTCAAGAGCGGAAACACTGGATGGATGAGCATGAGCCGGAACTGGGGTCAAAACTGGCAATCTAATTCCGCCTTGGTGGGCCAAACTCTCTCCTTTAGAGTCACGGGCAGTGACGGACGCACCTCCACGTCATGGAACGTGGCGCCATCCAATTGGAAGTTCGGTCAGACATTCAGCGGGAAGAATTTCCGCGTCTGA 777 56.11 MGAVTLLCFVSLVLLLALVDARIPGVYSGGAWEGAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCADDPKWCHPGNPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVACRKAGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKSGNTGWMSMSRNWGQNWQSNSALVGQTLSFRVTGSDGRTSTSWNVAPSNWKFGQTFSGKNFRV 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4754375 4755628 - Bpe015405.1 Bpe04g00743 102552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00743 258 PANTHER EXPANSIN 3 257 - -
Bpe04g00743 258 Pfam Lytic transglycolase 67 154 IPR009009 -
Bpe04g00743 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 253 IPR007117 -
Bpe04g00743 258 SMART dpbb_1 67 154 IPR007112 -
Bpe04g00743 258 Gene3D - 164 256 IPR036749 -
Bpe04g00743 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Bpe04g00743 258 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Bpe04g00743 258 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Bpe04g00743 258 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Bpe04g00743 258 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Bpe04g00743 258 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Bpe04g00743 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 164 IPR007112 -
Bpe04g00743 258 SUPERFAMILY Barwin-like endoglucanases 31 182 IPR036908 -
Bpe04g00743 258 Gene3D - 20 160 IPR036908 -
Bpe04g00743 258 SUPERFAMILY PHL pollen allergen 162 252 IPR036749 -
Bpe04g00743 258 Pfam Expansin C-terminal domain 165 242 IPR007117 -
Bpe04g00743 258 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Bpe04g00743 258 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Bpe04g00743 258 PANTHER EXPANSIN-A15 3 257 IPR002963 GO:0009664
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01834 Bpe04g00743 CCT
Bpe03g01037 Bpe04g00743 CCT
Bpe04g01834 Bpe04g00743 ECH
Bpe03g01037 Bpe04g00743 ECH
Bpe04g00743 Bpe04g01834 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00743 Bpe-Chr4:4754375 Bpe13g01406 Bpe-Chr13:19294928 4.49E-128 dispersed
Bpe11g01434 Bpe-Chr11:10660893 Bpe04g00743 Bpe-Chr4:4754375 1.15E-45 transposed
Bpe01g00128 Bpe-Chr1:758960 Bpe04g00743 Bpe-Chr4:4754375 3.51E-159 wgd
Bpe03g01037 Bpe-Chr3:29712682 Bpe04g00743 Bpe-Chr4:4754375 2.01E-165 wgd
Bpe04g00743 Bpe-Chr4:4754375 Bpe04g01713 Bpe-Chr4:22972599 5.27E-157 wgd
Bpe04g00743 Bpe-Chr4:4754375 Bpe04g01834 Bpe-Chr4:23631699 1.48E-162 wgd
Bpe04g00743 Bpe-Chr4:4754375 Bpe08g00100 Bpe-Chr8:548069 2.51E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00743 - - vvi:100245911 476.863