Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00750 ATGGCCAACTTTCGATTTCTCAGCTTCTTATCTGCTCTCATCGTCCTCACAATGCCTTCTTTTTCCCAGCCCACCGACCTCTTCTATGCTGGATTTTCCAACACAGGAGCAAATCTGACCTTAATCGGCATAGCGGAGATCGAGGACAATGGAATTTTGACGCTCACTAACGAGACCAGTAGATTACTGGGTCGAGCTTTTTATGCTTCCCCTTTTCTGTTTAAGAACTCTACAGATGGTAAAGTTTTATCTTTTTCTTCCTCGTTTGCTTTCGGAATCATTCCTGAGTACCCGAGGCTCGGCGGCCATGGATTGGCCTTCACCATAGCTCCGTCGAAGGACTTCAACGCTCTCCCCAGTCAGTATCTGGGTCTTCTTAATGCCAACGACACTGGTAATTTCTCAAATCATATCTTCGCCGTTGAGTTCGACACTGTTCGGGATTTTGAGTTCGGAGATATCAACGATAACCATGTCGGAATCGACATTAACAGTATGCAGTCTAATGCTTCCACCGCCGCTGGTTATTACTCTGATGAATCGACGAAACAGGATCTGAATCTGAAAGGTGGGAAAGCAATCAAAACTTGGATCGATTACGATTCAGTGAATTCTATTTTTAATGTGACGATTTCGCCGTTTACGACCAAACCAATCAAACCCATCTTGTCATTCAAGGTAGATCTCTCGCCCATTTTTGAGGATTACATGTATGTCGGATTCTCTGCTTCAACTGGTTTGCTCGCTAGCTCACACTATATATTAGGATGGAGCTTCAAGATGAACGGACAAGCTCAAGAGCTCGATTTATCCTCTCTTCCGTCACTTCCAGTTGTAGAACCCCCGAAAAAGCAGACAGCTTTAATAATTGTAGTTTCAGTTGCGGCTACCATTGTATTTGTTTTTGCAGTAATTTCCGTCGTTTATCTCGTAAGAAAAATAAAAAACGCTGATATAACCGAGCCATGGGAGCTTCAAGTGGGTCCACATAGATACTCTTACAAAGAGCTCAAGCAAGCGACTAGAGGTTTCAGAGACAAAGAGCTTCTCGGCCGTGGTGGATTCGGAAAAGTCTTCAAAGGATTTTTACCAAAATCAAAAACTCAAATCGCAGTAAAGCAAATTTCCCGCGAATCAAAACAGGGCCTGCGCGAATTCGCCGCCGAAATAGCCACCATTGGCCGGCTTCGTCACCGGAACTTAGTTCAGCTCCTCGGATGGTGCCGTCGGCGCGGCGATCTTCTCCTTGTTTACGACTTTATGGCGAACGGAAGCTTGGACCAGATCCTTTTCGACGACTCAAAACCGATTTTGAATTGGGAGCAAAGATTTAAGATCATAAAGGGCGTTGCTTCGGGGCTTTTATATCTGCACGAAGGCTTCGAACAGGTGGTGATTCACAGAGATGTTAAAGCAAGCAACGTTTTGCTTGATAGTGATTTGACGGGGAAAGTCGGAGATTTCGGTCTGGCTAGGCTCTACGAACACGGCGCGAATCCGAGCACGACGAGGGTCGTTGGAACTTTAGGGTATCTAGCTCCGGAGCTACCGAGAACCGGCAAAGCCACCACCAGCACAGATGTATTCGCGTTCGGAGCTCTTCTGCTCGAAGTTGCGACCGGAAGAAGACCCATTGAGCCGAAAGCTACGCCGGAGGAGGTAGTTTTGGTAGATTGGGTGTGGGATAAGTACAAGGAGGGAGCTATTTTTGATGTGGTTGATCGGAAACTGAACGGCGACTACGATGAGGTTGAAATGGCTGTGGTTTTGAAGCTGGGGTTGATGTGTTCTTGCAACTCTCCGGTGGATCGGCTGAGCATGAAGCAGGTTGTCAGGTATTTGGAGGGGGAGATTAGTTTGGCGGACGATTTGGTGGCTGCCGGCTGTTACGACGGAGGAAAGGCCCGGCACGGCGATGGGTTTGATGAATTTGTTAACTCTTTTGCTTCTTCGTTCAACCTTGCCACCTCTTCTTCCTTCGCTACAAATAGGGATATGGATGGTAGCTTTGCTTCTCTTTCTCCTCGTCCTATTCTTGGTAGACAATAA 2049 46.8 MANFRFLSFLSALIVLTMPSFSQPTDLFYAGFSNTGANLTLIGIAEIEDNGILTLTNETSRLLGRAFYASPFLFKNSTDGKVLSFSSSFAFGIIPEYPRLGGHGLAFTIAPSKDFNALPSQYLGLLNANDTGNFSNHIFAVEFDTVRDFEFGDINDNHVGIDINSMQSNASTAAGYYSDESTKQDLNLKGGKAIKTWIDYDSVNSIFNVTISPFTTKPIKPILSFKVDLSPIFEDYMYVGFSASTGLLASSHYILGWSFKMNGQAQELDLSSLPSLPVVEPPKKQTALIIVVSVAATIVFVFAVISVVYLVRKIKNADITEPWELQVGPHRYSYKELKQATRGFRDKELLGRGGFGKVFKGFLPKSKTQIAVKQISRESKQGLREFAAEIATIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDQILFDDSKPILNWEQRFKIIKGVASGLLYLHEGFEQVVIHRDVKASNVLLDSDLTGKVGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSTDVFAFGALLLEVATGRRPIEPKATPEEVVLVDWVWDKYKEGAIFDVVDRKLNGDYDEVEMAVVLKLGLMCSCNSPVDRLSMKQVVRYLEGEISLADDLVAAGCYDGGKARHGDGFDEFVNSFASSFNLATSSSFATNRDMDGSFASLSPRPILGRQ 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4782370 4784418 - Bpe015412.1 Bpe04g00750 102559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00750 682 CDD lectin_legume_LecRK_Arcelin_ConA 29 263 IPR001220 GO:0030246
Bpe04g00750 682 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 9 667 - -
Bpe04g00750 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 279 IPR013320 -
Bpe04g00750 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bpe04g00750 682 PANTHER - 9 667 - -
Bpe04g00750 682 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00750 682 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246
Bpe04g00750 682 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Bpe04g00750 682 Gene3D - 25 262 - -
Bpe04g00750 682 SUPERFAMILY Protein kinase-like (PK-like) 326 616 IPR011009 -
Bpe04g00750 682 CDD STKc_IRAK 350 616 - -
Bpe04g00750 682 Pfam Protein kinase domain 345 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00750 682 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Bpe04g00750 682 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00750 682 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00882 Bpe-Chr2:6816478 Bpe04g00750 Bpe-Chr4:4782370 1.14E-14 dispersed
Bpe02g01903 Bpe-Chr2:21007592 Bpe04g00750 Bpe-Chr4:4782370 2.29E-170 dispersed
Bpe04g00750 Bpe-Chr4:4782370 Bpe12g00669 Bpe-Chr12:12342232 8.44E-155 dispersed
Bpe04g00750 Bpe-Chr4:4782370 Bpe04g00752 Bpe-Chr4:4806396 0 proximal
Bpe02g00866 Bpe-Chr2:6553744 Bpe04g00750 Bpe-Chr4:4782370 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63297 PF00069 Pkinase 5.80E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00750 - - jre:109006813 945.266