Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00807 ATGGCAGAACGGGAACTAAGGCTTCCACCCGCCCCTCCACCTTCTCCCGTCGCTGGATCTACTCTCCTCGGAAAATACCAGCTCGGCCGCTTCCTTGGCCGTGGTAGCTTCGCCAAAGTCTACTTGGCTCGCTCTCTTCTCGACGACTCCTCCGTTGCTGTCAAAATCATCGACAAGATCAAAACCATTGACGCCGCGATGGAACCGAGGATAATCCGAGAAATCGACGCCATGCGCCGCCTTCAACACCACCCTAACATTCTCAAGATTCATGAAGTCATGGCTACCAAATCGAAGATTTACCTCGTCGTTGAGTTCGCCTCGGGTGGTGAACTTTTCGAGAAAATATCTCGCCGCGGCCGGCTCTCGGAGTCCCTCGCTCGCCGGTACTTTCAGCAGCTTGTTTTTGCTTTAGAATTCTGTCACAAGAATGGCGTCGCTCATCGAGATGTGAAGCCTCAGAATCTCCTCCTTGATAAGGACGGCATTTTGAAAGTCTCCGATTTTGGCCTCTCGGCGTTACCGGAGCAGCTTCAGAATGGCTTGCTCCACACCGCCTGTGGAACTCCGGCATACGCTGCTCCAGAGATTGTCTCCAGGCAAGGCTACGACGGTTCGAAAGCCGATGCGTGGTCCTGTGGTGTCATCCTGTTCGTCTTACTTTCCGGTTACCTTCCGTTCGACGATCGCAACATCGTCGCGATGTACCAGAAAATTTACCGCCGAGATTATCAATTTCCGGACTGGATTTCGAAGCCTGCGAAACACCTGATATTTCAGCTTCTCGATCCGAATCCGAAATCCAGGATAGGCATTGAAGCTCTCACGCAAAATTCCTGGTTCCGAAAATCTTTACAATGGAAGCTTCAAAAAGACAGTGATGGCGAAAAATTTCTCATGGAGTCGTCAAAGAATGGCGAGTTGGAAAATGACGTACCGGTGATGAACGCATTCGACATAATCACGATGTCGCCAGGGCTGAACCTGTCGGGGCTTTTCGAAGAGTCGGCGAAGAAGAAGGAGAAGAGATTCACAACGACATTCACGGCAGACGAGGTGGAAAAGAAACTCACGGTGATCGGAGGAGAATTAGGGTTTCGAGTGACAAGATGTGGGGAAAGCAGAAGAATAAGGATGGGGAAAGGGAGGGTGGTTTTGATGGTGGAAGTGTTGGAAATGGCGCCGAGTCTGTTGATAGTGGAGATGAAGGCGGTCGAGGCGGAGGTGGAGTTCGAGGAGCTTCAATGGAGGGATTTGAAGACGAAGCTTCAAGATGTTGTAGTTGCATGGCACTGCAACGAGTAA 1305 51.03 MAERELRLPPAPPPSPVAGSTLLGKYQLGRFLGRGSFAKVYLARSLLDDSSVAVKIIDKIKTIDAAMEPRIIREIDAMRRLQHHPNILKIHEVMATKSKIYLVVEFASGGELFEKISRRGRLSESLARRYFQQLVFALEFCHKNGVAHRDVKPQNLLLDKDGILKVSDFGLSALPEQLQNGLLHTACGTPAYAAPEIVSRQGYDGSKADAWSCGVILFVLLSGYLPFDDRNIVAMYQKIYRRDYQFPDWISKPAKHLIFQLLDPNPKSRIGIEALTQNSWFRKSLQWKLQKDSDGEKFLMESSKNGELENDVPVMNAFDIITMSPGLNLSGLFEESAKKKEKRFTTTFTADEVEKKLTVIGGELGFRVTRCGESRRIRMGKGRVVLMVEVLEMAPSLLIVEMKAVEAEVEFEELQWRDLKTKLQDVVVAWHCNE 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5312150 5313454 - Bpe015467.1 Bpe04g00807 102616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00807 434 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00807 434 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00807 434 PANTHER SERINE/THREONINE KINASE 17 432 - -
Bpe04g00807 434 CDD CIPK_C 316 403 - -
Bpe04g00807 434 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 432 - -
Bpe04g00807 434 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Bpe04g00807 434 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00807 434 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Bpe04g00807 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Bpe04g00807 434 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Bpe04g00807 434 SUPERFAMILY Protein kinase-like (PK-like) 23 291 IPR011009 -
Bpe04g00807 434 Gene3D Transferase(Phosphotransferase) domain 1 109 307 - -
Bpe04g00807 434 Gene3D Kinase associated domain 1, KA1 311 428 - -
Bpe04g00807 434 Pfam NAF domain 314 369 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00807 Bpe-Chr4:5312150 Bpe01g00862 Bpe-Chr1:17657866 5.54E-130 dispersed
Bpe04g00807 Bpe-Chr4:5312150 Bpe11g01580 Bpe-Chr11:11867642 5.72E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63300 PF00069 Pkinase 1.50E-69 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00807 K12761 - csv:101215156 568.926