Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00812 ATGACTCTGGTTTTAGACTCCAGTATCGACAAAATCCAAGTGTTTCTTGATGGATTTTCCGGCAAAAACTATTATTGTTCACCCCGAACCTCAAAACTTCGACCTGTTTTCATCACCGTTTACTTCTCTAGGGCGCTTTGGAATGGCTCTCTGAGAAGGGTTAAGGGAAGTTTATCACCTGAAATCACTCTTCTTGTTGATGAAGACCACCATGGCTTCCGCCTCGATCAGGCCACCCTCAGTGCTCTCGTGAAGGAAAGGAATCTTCCAAAACTTGGCGAAAATGGGGGAGTGAAGAAAATAGCGTCGGATTTGAAAACGGAACTGGAGATCGGAATCAATGAGGACGAAGAGGAAATGGACCGTCGGGTGCAAGCATTCGGTTCGAACACTTACAGAACGCCGCCGGCGAAGAGCTTCTTCTTCTTCGCTTGGGAAGCTTTGAAAGATCTGACGATTCTGATTCTCCTCGGCTGCGCTGCTCTTTCTCTCGGATTCGGAATCAAACAACACGGAATCAAAGAAGGATGGTACGATGGAGGAAGCATATTCGTGGCAGTTTTCATCGTTATCTTATTCTCTGCAATTAGTAATTACAGACAAAACAAACAGTTCGAGATATTATCAAAACTCAGTGATGATATCCAAATCGAAGTTTTACGGCGAGGAAGACGACGACCAGTTTCCATTTTCAACATCGTCGTCGGAGAAATTGTTTGTCTGAAGATTGGAGATCAGATTCCGGCCGACGGGCTGTTCGTCGACGGGTATGGTTTGCAAGTCGACGAATCGAGTATGACCGGAGAAAGCGAGCACGTGGAAGTAAATCGAACGGAGAATCCATTTTTGATTTCTGGAACCAAAGTGGTTGATGGATTTGGACAAATGATCGTCACTTCGGTAGGGATGAATACTACCTGGGGAGAAATGATGAGCTCAATTAGTAGAGATACGGCGGAACAGACGCCATTACAAGCAAGGTTGAATAAGCTTACGTCCTCGATCGGAAAAGTGGGTTTAACAGTGGCGTCTTTAGTTCTTGTGGTTTTGTTAGTACGATTTTTCACCGGAAATACAGAAGACGAGAATGGAAATCCGGAGTTTGTTAGAGGGAAAACAAAGTTCGACGATATCATTAATGGCGTTATTGCAATTATTGCTGCGGCTGTAACTATCGTCGTCGTTGCGATTCCGGAAGGGCTACCTCTGGCGGTGACGTTAACTCTTGCTTATTCGATGAAGAGAATGATGGCCGATCAGGCTATGGTGAGGAAGCTTTCTGCCTGCGAGACTATGGGGTCGGCTACCACGATTTGTACCGACAAAACGGGGACTCTAACGATGAACCAGATGAAGGTGACGAAATTCCTAGTCGGTGGAGATCAGTCAATGGCGGCGGCGAATATTTCGCAAGATCTTCTAGAGATTATTCATCAGGCGGTGGGATTAAACACGACGGGAAGCGTTTACAAGTCTGGTTCGTCGAAATCGGAGATTGAGTTCTCCGGGAGTCCGACGGAAAAAGCTATTCTTTCTTGGGCTGTCATGGAGATGAAGATGAAAATGGAAGAAATCACGAAAAACTATACAACGCTCCACGTGGAAACCTTCAACTCGAAGACGAAAAGAAGCGGGGTTTTGATAAAAAGTAACAAACAGAGCTTTAACAATGGCGGCCATCTCCATTGGAAAGGAGCAGCAGAAATGCTACTAGCGATGTGTTCGAGCTATTACGACATTAATGGAGCAAAAAAAGATCTCAAAGAAGACGAAAAGGTGAATTTCGAGCGTATAATTGAAGGAATGGCCGCCAGTAGTCTCAGATGCATAGCTTTTGCACATACAGAAATTGCAGAGCTAGAGGCTGAAGATGAACCAGATAGCCGGAAACTGAAAGAAGAGGGTTTGACCCTTATCGGGTTCGTAGGAATTAAAGACCCATGTAGGCATGGTGTGAGAGAAGCCGTCGAGGGCTGCCAGTACGCTGGCGTGACTGTGAAAATGATCACCGGAGACAACATTTTTACGGCGAAAGCAATCGCCACAGAGTGCGGAATTCTCCGGCCAAACATGGGAGAAGAAGCGGTGGTCGAAGGAGCAGAATTCAGAAACTACACACCGGAAGAAAGATTACAGAAAGTAGATCAAATCTGCGTAATGGCAAGATCTTCACCCTTCGACAAACTTCTAATGGTGCAGTGCCTGAAACAGAAAGGCCACGTCGTCGCCGTCACAGGCGACGGAACGAACGACGCTCCGGCTTTGAAAGAAGCTGACATCGGGCTCTCTATGGGAATTCAAGGAACAGAAGTGGCAAAAGAAAGCTCCGACATAGTAATAATGGACGACAACTTCTCCTCCGTCGTAACAGTTCTAAAATGGGGAAGATGCGTTTACACCAACATCCAAAAATTCCTCCAGTTCCAACTCACCGTCAACGTCGCCGCCCTCGTAATAAACTTCGTCGCCGCCGTGTCATCCGGAGAAGTACCATTAACGGCGGTCCAACTCCTCTGGGTAAACCTGATAATGGACACTCTAGGAGCTCTCGCGCTAGCCACAGAAGGACCGACAAAAGATCTAATGGACAAAAAACCAGTGGGTCGAACAGAGCCTCTAATAACAAACGCAATGTGGAGAAACCTTCTAGCCCAAGCTTTTTACCAGATCGCCATTCTTCTTGTTCTGCAGTTTGAAGGGGAAGCCATATTCGGGGTGAGCAAGAAGGTCAAGGAGACGTTGATCTTCAACACCTTCGTCTTGTGTCAAGTTTTCAACGAGTTTAATGCGAGGAAGATAGAGAAGAGGAATGTTTTCAAGGGCATTCTGAAGAATAAGCTGTTCTTGGGGATCGTCGGATTTACAGTTGTTCTTCAGGTGGTGATGGTGGAGTTTCTGAAGAGATTTGCAGGCACTGAGAGGCTGACTTTCGGGGAGTGGGGAGTTTGTGTGGCTATGGCCTCCGTTACCTGGCCGATTGGTTGGGTTGTTAAGCTTATTCCTGTCCCGGATAGGCCTGTCCTCGGTTACCTGACCATGTTTTCCCTTAAAAGTTATAGGAAATAA 3066 46.44 MTLVLDSSIDKIQVFLDGFSGKNYYCSPRTSKLRPVFITVYFSRALWNGSLRRVKGSLSPEITLLVDEDHHGFRLDQATLSALVKERNLPKLGENGGVKKIASDLKTELEIGINEDEEEMDRRVQAFGSNTYRTPPAKSFFFFAWEALKDLTILILLGCAALSLGFGIKQHGIKEGWYDGGSIFVAVFIVILFSAISNYRQNKQFEILSKLSDDIQIEVLRRGRRRPVSIFNIVVGEIVCLKIGDQIPADGLFVDGYGLQVDESSMTGESEHVEVNRTENPFLISGTKVVDGFGQMIVTSVGMNTTWGEMMSSISRDTAEQTPLQARLNKLTSSIGKVGLTVASLVLVVLLVRFFTGNTEDENGNPEFVRGKTKFDDIINGVIAIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTMNQMKVTKFLVGGDQSMAAANISQDLLEIIHQAVGLNTTGSVYKSGSSKSEIEFSGSPTEKAILSWAVMEMKMKMEEITKNYTTLHVETFNSKTKRSGVLIKSNKQSFNNGGHLHWKGAAEMLLAMCSSYYDINGAKKDLKEDEKVNFERIIEGMAASSLRCIAFAHTEIAELEAEDEPDSRKLKEEGLTLIGFVGIKDPCRHGVREAVEGCQYAGVTVKMITGDNIFTAKAIATECGILRPNMGEEAVVEGAEFRNYTPEERLQKVDQICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLKWGRCVYTNIQKFLQFQLTVNVAALVINFVAAVSSGEVPLTAVQLLWVNLIMDTLGALALATEGPTKDLMDKKPVGRTEPLITNAMWRNLLAQAFYQIAILLVLQFEGEAIFGVSKKVKETLIFNTFVLCQVFNEFNARKIEKRNVFKGILKNKLFLGIVGFTVVLQVVMVEFLKRFAGTERLTFGEWGVCVAMASVTWPIGWVVKLIPVPDRPVLGYLTMFSLKSYRK 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5343498 5346847 - Bpe015472.1 Bpe04g00812 102621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00812 1021 SFLD p-type atpase 421 798 IPR044492 -
Bpe04g00812 1021 Gene3D - 146 999 - -
Bpe04g00812 1021 Pfam haloacid dehalogenase-like hydrolase 436 759 - -
Bpe04g00812 1021 Pfam E1-E2 ATPase 216 417 - -
Bpe04g00812 1021 PRINTS P-type cation-transporting ATPase superfamily signature 745 764 - -
Bpe04g00812 1021 PRINTS P-type cation-transporting ATPase superfamily signature 662 672 - -
Bpe04g00812 1021 PRINTS P-type cation-transporting ATPase superfamily signature 439 453 - -
Bpe04g00812 1021 PRINTS P-type cation-transporting ATPase superfamily signature 262 276 - -
Bpe04g00812 1021 PRINTS P-type cation-transporting ATPase superfamily signature 640 651 - -
Bpe04g00812 1021 PRINTS P-type cation-transporting ATPase superfamily signature 769 781 - -
Bpe04g00812 1021 Gene3D - 117 315 - -
Bpe04g00812 1021 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 381 463 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g00812 1021 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 826 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g00812 1021 Pfam Cation transporting ATPase, C-terminus 830 1000 IPR006068 -
Bpe04g00812 1021 SFLD Haloacid Dehalogenase 421 798 - -
Bpe04g00812 1021 PRINTS H+-transporting ATPase (proton pump) signature 595 613 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g00812 1021 PRINTS H+-transporting ATPase (proton pump) signature 777 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g00812 1021 PRINTS H+-transporting ATPase (proton pump) signature 745 761 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g00812 1021 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 79 1002 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bpe04g00812 1021 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 446 644 IPR023299 GO:0000166
Bpe04g00812 1021 PANTHER CATION TRANSPORTING ATPASE 36 989 - -
Bpe04g00812 1021 SUPERFAMILY Calcium ATPase, transduction domain A 217 313 IPR008250 -
Bpe04g00812 1021 SMART Cation_ATPase_N_a_2 92 168 IPR004014 -
Bpe04g00812 1021 PANTHER CALCIUM-TRANSPORTING ATPASE 36 989 - -
Bpe04g00812 1021 ProSitePatterns E1-E2 ATPases phosphorylation site. 441 447 IPR018303 -
Bpe04g00812 1021 SUPERFAMILY HAD-like 437 850 IPR036412 -
Bpe04g00812 1021 Gene3D - 449 647 IPR023299 GO:0000166
Bpe04g00812 1021 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 1002 IPR023298 -
Bpe04g00812 1021 Pfam Cation transporter/ATPase, N-terminus 96 163 IPR004014 -
Bpe04g00812 1021 Gene3D - 436 790 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00812 Bpe-Chr4:5343498 Bpe09g00633 Bpe-Chr9:14991779 0 dispersed
Bpe04g00812 Bpe-Chr4:5343498 Bpe03g01107 Bpe-Chr3:30189882 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00812 K01537 - vvi:100259585 1365.13