Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00817 ATGGGAAAGACAGGCTCGTGGCTGAGAAGCTTGTTGACGGGGAAGAAAGAGAAGAAGGAAAAATACCCAAGGAATCCAAATTCTTCCGTTTTGATTCAGAATTCAGTTCCTCCTCCTACGTCAAAAGAAAGAAGAAGATGGAGTATCAGAAAATCTTCATCCGCTGCGAAGGATGATAAGAACTCAAATCCGAACCAGTCAACTGTCGGCCATTTTTCCGGCATTCATGTCTACAAGACAGTGAATAACACATCCTCGATTGAAAATGCTGCAGCGACGAGAATTCAGTCAGCTTTTCGGTCTTATTTGGCAAGAAAGGCTCTTTGTGCACTGAGAGGATTGGTGAAGTTACAGGCGTTGGTTAGAGGTCATATGGTGAGAAAACAGGCTACCGCCACTCTCCGCCGCATGCAGGCGCTGATGACAGCACAGGCTCGAGCTCGCGCGCAGAGGCTTCAAATGGCGGAAGATTATTCAAATCATTTAAATCTGGCGTTGACGCAGGAGACTGAAAGAGGAATGGAGGAGCATATCAAGGTTGTGGAGGTCGATCATGGAGAATACAAGGGATTTACAAATTACACAAAGAGAGACAGAAAAGAAAATAATAAATTTTCAACCAAGCAAGAACATCCTCAAACCAGCCGCAGCTCACCGGCCAAAACTGGCCATTTTGACGGTAATTCACCAACCATCCGACGAAGCAGCCCACAAAACAAGCCAAATTATGTGGAATTTCAGGCCAATGATTGCCCGTTCTACCCTAATTACATGGCCAATACCGAGTCCTCAAGGGCTAAAGTTAGGTCCCAGAGTGCACCCAAGACTAGACCACCCGACTCGTCAGAGAGCCAACCGAGCCGGAGACGAGCATCGATGGAAGGCCGGTATTGCCCGAGGCCAGTTCGGACCATGCAACGGTCGGCTTCCCAAGTCGGGTGGGGAGCTCAAAACAATGACAATCCATGGTCAGTTAAGCTGGACAAATCTTCAGTTTCACTCAAGAACAGCGAATGTGGCTCTACTAGCACAATTCTATCAAGAACCCACTATTGCAGATCTCTTGCTGCTTATGATAGTTTCAAACATGGAGTCCAAATTCCTCCATCTAAACCATTCCTAGAGTCTCTCAAATCGACACTGAAAGAGACTCTATTTCCTGATGATCCTTTCAGACAGTTCAAGAATCAGCCATTCTCCAGGAAGATCTTTCTCGGACTTCAGTACTTCGTGCCGATTGTTGAATGGGGTCCTCGCTATTCTTTCCAATTCTTCAAGAGTGATGTTGTTTCGGGAATCACCATTGCCAGTTTGGCTGTTCCACAGGGTATAAGCTATGCGAATTTGGCGAGTATTCCTCCAATTATTGGACTCTATTCAAGCTTTGTTCCTCCATTGATTTACACGATGCTTGGAAGTTCAAAGGATATTGCTGTAGGAACTATTGCAGTTGTGTCTCTTCTCATGACTGCCATGCTCGGAAAAGTTGTTAACCCTAAGCAGAACCCCGTCGAGTATGTTCACTTGGTTTTCACTGCAACTTTCTTTGCTGGTGTCTTTCAAGCTGCCCTTGGCTTCTTAAGGCTAGGGTTTGTGGTGGATTTTCTATCGCATGCGACAATAGTAGGTTTCATGGGAGGAGCAGCTACAGTTATATGTCTGCAACAGCTGAAAGGGATTCTTGGTTTAGTTCATTTCACTCATGAAACTGATATTGTGTCAGTCTCAACGTCTATTTTCTCCCAAGTTCACCACTGGAGGTGGGAGACTGTCGTTATGGGCTGCTGCTTTCTTTGCTTCCTCGTCGTCTCTAGAATATATAGCAAGAAGAAGCAGGTGTTCTTCTGGATAAACGCTTTGGCTCCATTGATATCTGTGATTCTTGGAAGTCTTTTTGTCTATCTCACTCGTGCTGAGAAGCATGGCGTTCAAGTTATTGGAGAGCTGAAGAAGGGGCTAAATCCAATTTCGTTGACTGACTTGGCATTTGGGTCACCACATCTAACCACTGCTATCAAAACTGGGATCATCTCTGGTACCATCGGCCTTGCTGAAGGAGTTGCAGTGGGAAGAAGCTTTGCCACATTTAAGAACTACCACATCAATGGCAATAACGAGATGATAGCTTTTGGGACGATGAACATCATAGGCTCTTTCACTTCTTGCTACCTAACTGGAGGACCATTCTCACGCACAGCAGTGAATTTTAATGCGGGATGTAAAAGTGCGATTTCAAATATTGTAATGGCATTTGGAGTGATGATGACTTTGTTATTTTTGACACCACTCTTCTATTACACTCCTCTTGTGGTGCTCTCTACTATAATCATCACTGCAATGCTAGGTCTAATAAACTACGAAGCTGTCATCCATCTGTGGAAGGTAGACAAATATGATTTTATGGTCTGTGTTGGCGCATATGTTGGCGTCGTTTTTGGGAGCATTGAAACCGGCTTAGTAGTAGCAGTCTCACTTTCCATGCTAAGAGTAGTCATGTTTGTGGCAAGACCAAAGACTCTCACACTAGGAAAAATCCCCAATTCCACAATTTACAGAAGTACAAATCAATACCCAAATACAGATTCTGTACCTGGAATTCTTATTCTGAAAATCGATGCACCAATCTACTTTGCCAACGCAAACTACCTCAGAGAAAGGGTCTTGAGGTGGATCTCCGAGGAGGAGGATCGACTCAAGTGTTTGGGGAAAACCAGCTTACAATATGTTATTATAGATACAAGCGTTGTTAGCAGCATTGATACTAGCGGGATTAGCTTTCTCGAAGAACTAAAGAATAATGTTGAAAGGAAAGACATCAAGCTCGTGCTTGCAAATCCACAAAGTGAAGTTATAAAAAAGCTAGTTAAGAGCAACTTCATTGAGACAATTGGGGAAGAGTGGATCCATCTCACCGTGGGAGAAGCCGTCGCTGCATGCAGCTTTATGCTTCACCCGTCAAAGACAGACCATCTTTCAGCTGAAGTTGTTGCAAATAATGACATAATTTAA 3009 44.17 MGKTGSWLRSLLTGKKEKKEKYPRNPNSSVLIQNSVPPPTSKERRRWSIRKSSSAAKDDKNSNPNQSTVGHFSGIHVYKTVNNTSSIENAAATRIQSAFRSYLARKALCALRGLVKLQALVRGHMVRKQATATLRRMQALMTAQARARAQRLQMAEDYSNHLNLALTQETERGMEEHIKVVEVDHGEYKGFTNYTKRDRKENNKFSTKQEHPQTSRSSPAKTGHFDGNSPTIRRSSPQNKPNYVEFQANDCPFYPNYMANTESSRAKVRSQSAPKTRPPDSSESQPSRRRASMEGRYCPRPVRTMQRSASQVGWGAQNNDNPWSVKLDKSSVSLKNSECGSTSTILSRTHYCRSLAAYDSFKHGVQIPPSKPFLESLKSTLKETLFPDDPFRQFKNQPFSRKIFLGLQYFVPIVEWGPRYSFQFFKSDVVSGITIASLAVPQGISYANLASIPPIIGLYSSFVPPLIYTMLGSSKDIAVGTIAVVSLLMTAMLGKVVNPKQNPVEYVHLVFTATFFAGVFQAALGFLRLGFVVDFLSHATIVGFMGGAATVICLQQLKGILGLVHFTHETDIVSVSTSIFSQVHHWRWETVVMGCCFLCFLVVSRIYSKKKQVFFWINALAPLISVILGSLFVYLTRAEKHGVQVIGELKKGLNPISLTDLAFGSPHLTTAIKTGIISGTIGLAEGVAVGRSFATFKNYHINGNNEMIAFGTMNIIGSFTSCYLTGGPFSRTAVNFNAGCKSAISNIVMAFGVMMTLLFLTPLFYYTPLVVLSTIIITAMLGLINYEAVIHLWKVDKYDFMVCVGAYVGVVFGSIETGLVVAVSLSMLRVVMFVARPKTLTLGKIPNSTIYRSTNQYPNTDSVPGILILKIDAPIYFANANYLRERVLRWISEEEDRLKCLGKTSLQYVIIDTSVVSSIDTSGISFLEELKNNVERKDIKLVLANPQSEVIKKLVKSNFIETIGEEWIHLTVGEAVAACSFMLHPSKTDHLSAEVVANNDII 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5392011 5399381 + Bpe015477.1 Bpe04g00817 102626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00817 1002 ProSitePatterns SLC26A transporters signature. 454 475 IPR018045 GO:0008271|GO:0008272
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 26 41 - -
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 282 296 - -
Bpe04g00817 1002 SMART iq_5 87 109 IPR000048 GO:0005515
Bpe04g00817 1002 SMART iq_5 110 131 IPR000048 GO:0005515
Bpe04g00817 1002 Pfam STAS domain 857 975 IPR002645 -
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 208 245 - -
Bpe04g00817 1002 TIGRFAM sulP: sulfate permease 412 975 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe04g00817 1002 PANTHER SULFATE TRANSPORTER 361 994 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe04g00817 1002 PANTHER BNAA04G05880D PROTEIN 361 994 IPR030311 GO:0008272|GO:0009507|GO:0015116
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 1 71 - -
Bpe04g00817 1002 Pfam Protein of unknown function (DUF4005) 237 294 IPR025064 -
Bpe04g00817 1002 SUPERFAMILY SpoIIaa-like 857 979 IPR036513 -
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 192 247 - -
Bpe04g00817 1002 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 262 296 - -
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 262 281 - -
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 192 207 - -
Bpe04g00817 1002 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Bpe04g00817 1002 Pfam IQ calmodulin-binding motif 115 129 IPR000048 GO:0005515
Bpe04g00817 1002 Pfam IQ calmodulin-binding motif 90 108 IPR000048 GO:0005515
Bpe04g00817 1002 Pfam Sulfate permease family 425 804 IPR011547 GO:0016021
Bpe04g00817 1002 MobiDBLite consensus disorder prediction 43 57 - -
Bpe04g00817 1002 ProSiteProfiles STAS domain profile. 856 979 IPR002645 -
Bpe04g00817 1002 Gene3D - 88 154 - -
Bpe04g00817 1002 CDD STAS_SulP_like_sulfate_transporter 857 972 - -
Bpe04g00817 1002 Gene3D STAS domain 836 981 IPR036513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00817 Bpe13g00591 CCT
Bpe04g00817 Bpe05g00890 CCT
Bpe04g00817 Bpe13g00591 ECH
Bpe04g00817 Bpe05g00890 ECH
Bpe04g00817 Bpe14g01207 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00817 Bpe-Chr4:5392011 Bpe08g00464 Bpe-Chr8:2980340 0 dispersed
Bpe09g00007 Bpe-Chr9:71830 Bpe04g00817 Bpe-Chr4:5392011 3.92E-19 dispersed
Bpe10g00674 Bpe-Chr10:13270447 Bpe04g00817 Bpe-Chr4:5392011 1.65E-18 dispersed
Bpe05g00891 Bpe-Chr5:22001712 Bpe04g00817 Bpe-Chr4:5392011 1.27E-11 transposed
Bpe09g00630 Bpe-Chr9:14961039 Bpe04g00817 Bpe-Chr4:5392011 1.34E-35 transposed
Bpe10g00380 Bpe-Chr10:11379341 Bpe04g00817 Bpe-Chr4:5392011 0 transposed
Bpe11g00223 Bpe-Chr11:1487296 Bpe04g00817 Bpe-Chr4:5392011 0 transposed
Bpe13g00591 Bpe-Chr13:13019910 Bpe04g00817 Bpe-Chr4:5392011 4.76E-81 wgd
Bpe14g01207 Bpe-Chr14:9009013 Bpe04g00817 Bpe-Chr4:5392011 1.32E-37 wgd
Bpe04g00817 Bpe-Chr4:5392011 Bpe05g00890 Bpe-Chr5:21999414 6.05E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00817 K17471 - csv:101203205 984.556