Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00833 ATGATGATGAGAATAGTGGCGTTGTACGATGATGTTCTCGGCAAAGGATCTTCGAAAACAGTGTATAAAGGTTTCGATGAATACCAAGGAATCGAAGTGGCGTGGAATCAAGTAAAACTCCTTGATTTTCTCCGAAACCCAGAAGATTTAGAGCGATTATATTGCGAAATCCATTTGTTGGAAACCTTAAAACACAAAAACATAATGAAATTCCATACTTCCTGGGTCGATGCTTCTAACAGAAACATCAATTTCGTCACTGAAATGTTCACCTCCGGCACTCTCCGACAATTCAGATTAAAACACAGGAGAGTTAACGTCAGAGCAGTGAAGCAATGGTGCAGACAGATTCTGAGGGGTCTCGTCTACCTCCATAACCACGATCCTCCAGTAATTCACAGAGACCTTAAATGTGACAACATTTTCGTCAATGGAAATCAAGGCGAAGTCAAGATCGGCGATCTGGGTCTTGCTGAATTCTTAAGAAAATCTCATGCTGATCACTGTGTAGGAACACCAGAGTTCATGGCTCCAGAGGTGTACGAAGAACAATATAATGAATTGGTGGACATCTATTCTTTTGGAATGTGTATTTTGGAAATGGTTACGCTTGAATATCCCTACTCTGAATGCACTACCCCTGCTCAGATTTATAAGAAAGTTATCTCGGGCATTAAACCGGGAGCTCTGTACAAAGTGAAAGACGAAGAAGTGAGGGAATTTGTGGGGAAATGCCTAGCAACTCTGCCGAATAGGCTCTCGGCAAAAGCTCTATTGAAAGATAGTTTTCTTCAAATCGAAGATTACGAGGCCTTTACGAGAGAAGCTGACGATATCACTGATTTTGAAGAAGTGGGCCCTCTTCTAAGGCAATCTTTACATCGAATTCATCGAAGTTGCGATTTTTCGACTAACGGGTCTGGGAATCGTATCGGTTTCGCATTGGAAAATGATGAGATTGAATTGAGCGAGATTGATCTTTTTTCTCATCATGAAGACGACCATGTTGGTAATGTCGATATCACGATAAAAGGAAGAAGAAGAGAAGATGATGGTATCTTTTTGAGGCTCAGAATCTTAGATAAAGAAGGTCGTGTTCGAAATATCTACTTCCCCTTTGATTTAGAGACTGACACTGGCTTAAGCGTCGCATCAGAAATGGTGGATGAGCTAGACATTCCGGATCAAGATGTATCCAAAATAGCTGATATGATCAATGCAGAGATATTGACTTTGGTCCCGAATTGGAAAACCGAGCTAAGCGGAGATAGTAATATTACGAGTTTATGTCATAATTGTGCTTCGAACAGTTCTGCATCAGATTATATTTCACCCCACAATCCATGCCCCAAAACCCTTCAAGTTCTTAGGTGCTCGAAAGACGGATGCGCCTCTGTCCATGGGCGTTTTGAAGAAATCATGTACCAAGTCGAAGGGTCGGAAAAATGTCTAGAAGAAAATTCGAACCAGGCATCAGAAAGATCTGCAAATTATGCTGATATTTGGGCACAAAGAGACGGACCAGAATTGAAGTTCGACGAAAAATCAAAGAAGGAAGGAGAAAATATCGATAGAGAGAAACTAGCGAAGATTAACGAAGAAGACTCGTTTTCGTCCAACCAATCATGTTCTTTTGGTTCCTCAGATGATCACGAAAATGAAATCAGACAAGAGCTTAGATGGCTCAAAGCCAAGTATCAAATGCAGCTAAGAGAGCTTAAGAACCAGCAACTCAGAGCAACAACCAAGTGCTCGAGTTTGAATCGAAACCTCAGAGATTCAACGTTCGACGATCGTGGTTGTCCGTTTATCGATGCCGATGACAAAGACGAAGGTAACGATACGTTCAAGCTCGAGTTTAGGACATCTAAGAGTTTCTACACCGGAGCCTTGAATTCTCTTCGCAGAGCAACCTCTCTACCTGTTGATGCAGTGCATGTTTAG 1944 41.67 MMMRIVALYDDVLGKGSSKTVYKGFDEYQGIEVAWNQVKLLDFLRNPEDLERLYCEIHLLETLKHKNIMKFHTSWVDASNRNINFVTEMFTSGTLRQFRLKHRRVNVRAVKQWCRQILRGLVYLHNHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAEFLRKSHADHCVGTPEFMAPEVYEEQYNELVDIYSFGMCILEMVTLEYPYSECTTPAQIYKKVISGIKPGALYKVKDEEVREFVGKCLATLPNRLSAKALLKDSFLQIEDYEAFTREADDITDFEEVGPLLRQSLHRIHRSCDFSTNGSGNRIGFALENDEIELSEIDLFSHHEDDHVGNVDITIKGRRREDDGIFLRLRILDKEGRVRNIYFPFDLETDTGLSVASEMVDELDIPDQDVSKIADMINAEILTLVPNWKTELSGDSNITSLCHNCASNSSASDYISPHNPCPKTLQVLRCSKDGCASVHGRFEEIMYQVEGSEKCLEENSNQASERSANYADIWAQRDGPELKFDEKSKKEGENIDREKLAKINEEDSFSSNQSCSFGSSDDHENEIRQELRWLKAKYQMQLRELKNQQLRATTKCSSLNRNLRDSTFDDRGCPFIDADDKDEGNDTFKLEFRTSKSFYTGALNSLRRATSLPVDAVHV 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5464926 5471260 - Bpe015493.1 Bpe04g00833 102642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00833 647 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 595 - -
Bpe04g00833 647 Gene3D Transferase(Phosphotransferase) domain 1 90 269 - -
Bpe04g00833 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Bpe04g00833 647 Gene3D Phosphorylase Kinase; domain 1 4 88 - -
Bpe04g00833 647 ProSiteProfiles Protein kinase domain profile. 7 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00833 647 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 354 407 IPR024678 GO:0004674|GO:0005524
Bpe04g00833 647 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 9 595 - -
Bpe04g00833 647 CDD STKc_WNK 9 264 - -
Bpe04g00833 647 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00833 647 SMART serkin_6 7 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00833 647 SUPERFAMILY Protein kinase-like (PK-like) 11 265 IPR011009 -
Bpe04g00833 647 Coils Coil 556 590 - -
Bpe04g00833 647 Gene3D - 333 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00833 Bpe-Chr4:5464926 Bpe05g00271 Bpe-Chr5:15721995 0 dispersed
Bpe04g00833 Bpe-Chr4:5464926 Bpe06g00276 Bpe-Chr6:13710977 7.41E-145 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63302 PF00069 Pkinase 7.10E-47 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00833 K08867 - zju:107423178 803.512