Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00833 | ATGATGATGAGAATAGTGGCGTTGTACGATGATGTTCTCGGCAAAGGATCTTCGAAAACAGTGTATAAAGGTTTCGATGAATACCAAGGAATCGAAGTGGCGTGGAATCAAGTAAAACTCCTTGATTTTCTCCGAAACCCAGAAGATTTAGAGCGATTATATTGCGAAATCCATTTGTTGGAAACCTTAAAACACAAAAACATAATGAAATTCCATACTTCCTGGGTCGATGCTTCTAACAGAAACATCAATTTCGTCACTGAAATGTTCACCTCCGGCACTCTCCGACAATTCAGATTAAAACACAGGAGAGTTAACGTCAGAGCAGTGAAGCAATGGTGCAGACAGATTCTGAGGGGTCTCGTCTACCTCCATAACCACGATCCTCCAGTAATTCACAGAGACCTTAAATGTGACAACATTTTCGTCAATGGAAATCAAGGCGAAGTCAAGATCGGCGATCTGGGTCTTGCTGAATTCTTAAGAAAATCTCATGCTGATCACTGTGTAGGAACACCAGAGTTCATGGCTCCAGAGGTGTACGAAGAACAATATAATGAATTGGTGGACATCTATTCTTTTGGAATGTGTATTTTGGAAATGGTTACGCTTGAATATCCCTACTCTGAATGCACTACCCCTGCTCAGATTTATAAGAAAGTTATCTCGGGCATTAAACCGGGAGCTCTGTACAAAGTGAAAGACGAAGAAGTGAGGGAATTTGTGGGGAAATGCCTAGCAACTCTGCCGAATAGGCTCTCGGCAAAAGCTCTATTGAAAGATAGTTTTCTTCAAATCGAAGATTACGAGGCCTTTACGAGAGAAGCTGACGATATCACTGATTTTGAAGAAGTGGGCCCTCTTCTAAGGCAATCTTTACATCGAATTCATCGAAGTTGCGATTTTTCGACTAACGGGTCTGGGAATCGTATCGGTTTCGCATTGGAAAATGATGAGATTGAATTGAGCGAGATTGATCTTTTTTCTCATCATGAAGACGACCATGTTGGTAATGTCGATATCACGATAAAAGGAAGAAGAAGAGAAGATGATGGTATCTTTTTGAGGCTCAGAATCTTAGATAAAGAAGGTCGTGTTCGAAATATCTACTTCCCCTTTGATTTAGAGACTGACACTGGCTTAAGCGTCGCATCAGAAATGGTGGATGAGCTAGACATTCCGGATCAAGATGTATCCAAAATAGCTGATATGATCAATGCAGAGATATTGACTTTGGTCCCGAATTGGAAAACCGAGCTAAGCGGAGATAGTAATATTACGAGTTTATGTCATAATTGTGCTTCGAACAGTTCTGCATCAGATTATATTTCACCCCACAATCCATGCCCCAAAACCCTTCAAGTTCTTAGGTGCTCGAAAGACGGATGCGCCTCTGTCCATGGGCGTTTTGAAGAAATCATGTACCAAGTCGAAGGGTCGGAAAAATGTCTAGAAGAAAATTCGAACCAGGCATCAGAAAGATCTGCAAATTATGCTGATATTTGGGCACAAAGAGACGGACCAGAATTGAAGTTCGACGAAAAATCAAAGAAGGAAGGAGAAAATATCGATAGAGAGAAACTAGCGAAGATTAACGAAGAAGACTCGTTTTCGTCCAACCAATCATGTTCTTTTGGTTCCTCAGATGATCACGAAAATGAAATCAGACAAGAGCTTAGATGGCTCAAAGCCAAGTATCAAATGCAGCTAAGAGAGCTTAAGAACCAGCAACTCAGAGCAACAACCAAGTGCTCGAGTTTGAATCGAAACCTCAGAGATTCAACGTTCGACGATCGTGGTTGTCCGTTTATCGATGCCGATGACAAAGACGAAGGTAACGATACGTTCAAGCTCGAGTTTAGGACATCTAAGAGTTTCTACACCGGAGCCTTGAATTCTCTTCGCAGAGCAACCTCTCTACCTGTTGATGCAGTGCATGTTTAG | 1944 | 41.67 | MMMRIVALYDDVLGKGSSKTVYKGFDEYQGIEVAWNQVKLLDFLRNPEDLERLYCEIHLLETLKHKNIMKFHTSWVDASNRNINFVTEMFTSGTLRQFRLKHRRVNVRAVKQWCRQILRGLVYLHNHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAEFLRKSHADHCVGTPEFMAPEVYEEQYNELVDIYSFGMCILEMVTLEYPYSECTTPAQIYKKVISGIKPGALYKVKDEEVREFVGKCLATLPNRLSAKALLKDSFLQIEDYEAFTREADDITDFEEVGPLLRQSLHRIHRSCDFSTNGSGNRIGFALENDEIELSEIDLFSHHEDDHVGNVDITIKGRRREDDGIFLRLRILDKEGRVRNIYFPFDLETDTGLSVASEMVDELDIPDQDVSKIADMINAEILTLVPNWKTELSGDSNITSLCHNCASNSSASDYISPHNPCPKTLQVLRCSKDGCASVHGRFEEIMYQVEGSEKCLEENSNQASERSANYADIWAQRDGPELKFDEKSKKEGENIDREKLAKINEEDSFSSNQSCSFGSSDDHENEIRQELRWLKAKYQMQLRELKNQQLRATTKCSSLNRNLRDSTFDDRGCPFIDADDKDEGNDTFKLEFRTSKSFYTGALNSLRRATSLPVDAVHV | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5464926 | 5471260 | - | Bpe015493.1 | Bpe04g00833 | 102642 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00833 | 647 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 9 | 595 | - | - | |
Bpe04g00833 | 647 | Gene3D | Transferase(Phosphotransferase) domain 1 | 90 | 269 | - | - | |
Bpe04g00833 | 647 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 131 | 143 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe04g00833 | 647 | Gene3D | Phosphorylase Kinase; domain 1 | 4 | 88 | - | - | |
Bpe04g00833 | 647 | ProSiteProfiles | Protein kinase domain profile. | 7 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g00833 | 647 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 354 | 407 | IPR024678 | GO:0004674|GO:0005524 | |
Bpe04g00833 | 647 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED | 9 | 595 | - | - | |
Bpe04g00833 | 647 | CDD | STKc_WNK | 9 | 264 | - | - | |
Bpe04g00833 | 647 | Pfam | Protein kinase domain | 11 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g00833 | 647 | SMART | serkin_6 | 7 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g00833 | 647 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 265 | IPR011009 | - | |
Bpe04g00833 | 647 | Coils | Coil | 556 | 590 | - | - | |
Bpe04g00833 | 647 | Gene3D | - | 333 | 418 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00833 | Bpe-Chr4:5464926 | Bpe05g00271 | Bpe-Chr5:15721995 | 0 | dispersed | |
Bpe04g00833 | Bpe-Chr4:5464926 | Bpe06g00276 | Bpe-Chr6:13710977 | 7.41E-145 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63302 | PF00069 | Pkinase | 7.10E-47 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00833 | K08867 | - | zju:107423178 | 803.512 |