Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00839 | ATGTTAGCGAATCACCTACAAAATGGGATCGAGACAGCGAAGCTGGTCTGGTCTCGTCTGCCGGACGCGGAAGACGGGGAACTTGATGAGGTTGGAATCTCAAAGAAGAGTGATAGATGTAGCGTGGAGAGTCTCGATTACGAGGTTATTGAAAATTATGCCTATTGGGAGGAGCAGTCTCAGCGTGGAAGACTTTTGGTTGGTTACTACGTAGTGGTTAAGTGGCTCTTTGCGTTGCTCATTGGCATCGGTACTGGGTTAGCGGCAGTTTTCATAAATATTTCTGTCGAGAACTTTGCTGGATGGAAGTTTGCATTGACATTTTCCATTATACAAAAATCGTATTTCGCTGGCTTTCTTGTATATGTATTGATCAACCTTGTTTTGGTCTTTTCCTCTGTATATATCATCACACATTTTGCACCAGCTGCAGCTGGATCTGGTATACCGGAAATAAAGGGCTATCTAAATGGTGTTGATATTCATGGTGTTCTTTTCTTCAGAACCTTAATTGGAAAGATATTTGGAAGCATTGGATCGGTAGGAGGGGGCTTGGCTTTAGGCAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGTATTGCTTCTTTACTAGGACAAGGTGGATCAACGAAATATCATCTGAGTTCCAGGTGGTTACAAGTATTTAAAAGTGATCGAGATCGCCGTGATCTCGTGACCTGTGGATGTGCAGCAGGAGTTGCTGCAGCTTTTAGAGCTCCAGTTGGTGGTGTATTATTTGCCTTGGAAGAAGTTACATCTTGGTGGAGGAGTCAGCTTATGTGGCGTGTATTTTTTACTTCTGCTATTGTTGCTGTTGTTGTCCGAACGGCAATGGGATGGTGTAAAAGTGGAAAGTGTGGACATTTTGGTTCTGGCGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGACTACTCTTTTGGAGAGTTGTTGCCGATGGCTATTATTGGGGTCATTGGAGGCTTATTGGGTGCGTTATTCAACCAGCTTACTCTTTACATAACTTACTGGCGCAGGAATTTCTTACATAAGAAAGGAAACAGAGTCAAGCAGATAATTGAGGCATGTATTATCTCCTTTGTCACGTCAATTATTTCTTTTGGGCTGCCACTTCTGAGAAAATGCAGCCCATGCCCAGTAGTAGATGCTGATTCTGGTATTGAATGCCCAAGGCCTCCGGGAATGTATGGAAATTATGTAAATTTTTACTGCAGTAAGGACAATGAGTACAATGACCTAGCCACAATTTTCTTTAACACACAGGATGATGCGATAAGGAATTTATTCAGCGCCAAAACCTTTCATGAGTTCAGCGCCCAAAGTTTATTGACCTTTTTGGTCATGTTTTATTCTCTAGCTGTGGTGACATATGGCACTGCTGTTCCTGCTGGCCAATTTGTACCTGGTATAATGATTGGATCCACATATGGCCGTTTAGTTGGCAAGTTGGTTGTTAACTTTTACCACAAGCCCAACATTGAAGAGGGAACATATGCTCTTTTGGGAGCTGCTTCTTTTCTTGGAGGGTCAATGCGGATGACTGTGTCCTTGTGTGTAATAATGGTTGAAATCACGAACAATTTGAAACTTCTACCACTTATCATGCTTGTTCTTCTTATCTCAAAGGCTGTTGGAGACACTTTCAACGAAGGACTATATGAGGAACAAGCACAATTGAAGGGTATCCCATTACTGGAGTCTAGACCAAAGTATCAGATGAGGAAAATTGCTGCAAAAGATGCCTGTGGAAGAAGGGTTGTCTCCTTTCCACGAGTGGTCAAGGTTGCAGACGTGGTTGAGATTTTGAGAAGCAACAATCATAATGGATTCCCTGTGATAGATCATGGAAGAAATGGGGAGGCACTTGTGATTGGGCTCGTTCTTCGAAGTCATCTTTTGGGGCTTCTTTTGTCGAAGGAAGATTTCCAGCATAGTCCTCTGCCTTCCGATCAAAGGGGATCCAGGCCAATCAGGCATAATTTGAGTGAGTTTGTGAAACCTGCTTCCAGTAAAGGCTTATCTATAGATGATATACATCTAAGCTCAGATGACTCAGAAATGTACATAGATCTTTTCCCATTTTTGAATCCCTCTCCATACATCGTTCCAGAAGACATGTCTTTGACGAAGGTATATAATCTTTTCAGGCAGCTAGGTCTAAGACATATATTTGTTGTCCCTCGTCCTTCGCGCGTTGTTGGTTTAATTACCAGGAAGGATTTGTTGATTGAGGATAATGACGATTCAGACACAGTGGAACTCCAATCGACCAGTGTAAGGTCTCTATGA | 2313 | 42.5 | MLANHLQNGIETAKLVWSRLPDAEDGELDEVGISKKSDRCSVESLDYEVIENYAYWEEQSQRGRLLVGYYVVVKWLFALLIGIGTGLAAVFINISVENFAGWKFALTFSIIQKSYFAGFLVYVLINLVLVFSSVYIITHFAPAAAGSGIPEIKGYLNGVDIHGVLFFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFGELLPMAIIGVIGGLLGALFNQLTLYITYWRRNFLHKKGNRVKQIIEACIISFVTSIISFGLPLLRKCSPCPVVDADSGIECPRPPGMYGNYVNFYCSKDNEYNDLATIFFNTQDDAIRNLFSAKTFHEFSAQSLLTFLVMFYSLAVVTYGTAVPAGQFVPGIMIGSTYGRLVGKLVVNFYHKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDTFNEGLYEEQAQLKGIPLLESRPKYQMRKIAAKDACGRRVVSFPRVVKVADVVEILRSNNHNGFPVIDHGRNGEALVIGLVLRSHLLGLLLSKEDFQHSPLPSDQRGSRPIRHNLSEFVKPASSKGLSIDDIHLSSDDSEMYIDLFPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLIEDNDDSDTVELQSTSVRSL | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5516404 | 5526312 | - | Bpe015499.1 | Bpe04g00839 | 102648 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00839 | 770 | ProSiteProfiles | CBS domain profile. | 703 | 759 | IPR000644 | - | |
Bpe04g00839 | 770 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 4 | 769 | - | - | |
Bpe04g00839 | 770 | Pfam | Voltage gated chloride channel | 130 | 553 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC-D | 4 | 769 | - | - | |
Bpe04g00839 | 770 | SUPERFAMILY | Clc chloride channel | 52 | 575 | IPR014743 | - | |
Bpe04g00839 | 770 | SMART | cbs_1 | 593 | 645 | IPR000644 | - | |
Bpe04g00839 | 770 | SMART | cbs_1 | 706 | 754 | IPR000644 | - | |
Bpe04g00839 | 770 | Gene3D | - | 575 | 756 | IPR046342 | - | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 469 | 489 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 560 | 574 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 237 | 256 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 522 | 541 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 173 | 192 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 142 | 159 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Chloride channel signature | 504 | 520 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe04g00839 | 770 | PRINTS | Plant CLC chloride channel signature | 48 | 56 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe04g00839 | 770 | PRINTS | Plant CLC chloride channel signature | 290 | 297 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe04g00839 | 770 | PRINTS | Plant CLC chloride channel signature | 258 | 266 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe04g00839 | 770 | PRINTS | Plant CLC chloride channel signature | 272 | 282 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe04g00839 | 770 | PRINTS | Plant CLC chloride channel signature | 421 | 437 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe04g00839 | 770 | Pfam | CBS domain | 587 | 645 | IPR000644 | - | |
Bpe04g00839 | 770 | Pfam | CBS domain | 704 | 750 | IPR000644 | - | |
Bpe04g00839 | 770 | ProSiteProfiles | CBS domain profile. | 590 | 650 | IPR000644 | - | |
Bpe04g00839 | 770 | SUPERFAMILY | CBS-domain pair | 579 | 750 | IPR046342 | - | |
Bpe04g00839 | 770 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 594 | 750 | - | - | |
Bpe04g00839 | 770 | Gene3D | Clc chloride channel | 67 | 574 | - | - | |
Bpe04g00839 | 770 | CDD | ClC_6_like | 43 | 573 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe04g00839 | Bpe05g00733 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00839 | Bpe-Chr4:5516404 | Bpe11g01498 | Bpe-Chr11:11105088 | 0 | dispersed | |
Bpe04g00839 | Bpe-Chr4:5516404 | Bpe05g00733 | Bpe-Chr5:20807724 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00839 | K05016 | - | jre:109005860 | 1327.38 |