Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00839 ATGTTAGCGAATCACCTACAAAATGGGATCGAGACAGCGAAGCTGGTCTGGTCTCGTCTGCCGGACGCGGAAGACGGGGAACTTGATGAGGTTGGAATCTCAAAGAAGAGTGATAGATGTAGCGTGGAGAGTCTCGATTACGAGGTTATTGAAAATTATGCCTATTGGGAGGAGCAGTCTCAGCGTGGAAGACTTTTGGTTGGTTACTACGTAGTGGTTAAGTGGCTCTTTGCGTTGCTCATTGGCATCGGTACTGGGTTAGCGGCAGTTTTCATAAATATTTCTGTCGAGAACTTTGCTGGATGGAAGTTTGCATTGACATTTTCCATTATACAAAAATCGTATTTCGCTGGCTTTCTTGTATATGTATTGATCAACCTTGTTTTGGTCTTTTCCTCTGTATATATCATCACACATTTTGCACCAGCTGCAGCTGGATCTGGTATACCGGAAATAAAGGGCTATCTAAATGGTGTTGATATTCATGGTGTTCTTTTCTTCAGAACCTTAATTGGAAAGATATTTGGAAGCATTGGATCGGTAGGAGGGGGCTTGGCTTTAGGCAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGTATTGCTTCTTTACTAGGACAAGGTGGATCAACGAAATATCATCTGAGTTCCAGGTGGTTACAAGTATTTAAAAGTGATCGAGATCGCCGTGATCTCGTGACCTGTGGATGTGCAGCAGGAGTTGCTGCAGCTTTTAGAGCTCCAGTTGGTGGTGTATTATTTGCCTTGGAAGAAGTTACATCTTGGTGGAGGAGTCAGCTTATGTGGCGTGTATTTTTTACTTCTGCTATTGTTGCTGTTGTTGTCCGAACGGCAATGGGATGGTGTAAAAGTGGAAAGTGTGGACATTTTGGTTCTGGCGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGACTACTCTTTTGGAGAGTTGTTGCCGATGGCTATTATTGGGGTCATTGGAGGCTTATTGGGTGCGTTATTCAACCAGCTTACTCTTTACATAACTTACTGGCGCAGGAATTTCTTACATAAGAAAGGAAACAGAGTCAAGCAGATAATTGAGGCATGTATTATCTCCTTTGTCACGTCAATTATTTCTTTTGGGCTGCCACTTCTGAGAAAATGCAGCCCATGCCCAGTAGTAGATGCTGATTCTGGTATTGAATGCCCAAGGCCTCCGGGAATGTATGGAAATTATGTAAATTTTTACTGCAGTAAGGACAATGAGTACAATGACCTAGCCACAATTTTCTTTAACACACAGGATGATGCGATAAGGAATTTATTCAGCGCCAAAACCTTTCATGAGTTCAGCGCCCAAAGTTTATTGACCTTTTTGGTCATGTTTTATTCTCTAGCTGTGGTGACATATGGCACTGCTGTTCCTGCTGGCCAATTTGTACCTGGTATAATGATTGGATCCACATATGGCCGTTTAGTTGGCAAGTTGGTTGTTAACTTTTACCACAAGCCCAACATTGAAGAGGGAACATATGCTCTTTTGGGAGCTGCTTCTTTTCTTGGAGGGTCAATGCGGATGACTGTGTCCTTGTGTGTAATAATGGTTGAAATCACGAACAATTTGAAACTTCTACCACTTATCATGCTTGTTCTTCTTATCTCAAAGGCTGTTGGAGACACTTTCAACGAAGGACTATATGAGGAACAAGCACAATTGAAGGGTATCCCATTACTGGAGTCTAGACCAAAGTATCAGATGAGGAAAATTGCTGCAAAAGATGCCTGTGGAAGAAGGGTTGTCTCCTTTCCACGAGTGGTCAAGGTTGCAGACGTGGTTGAGATTTTGAGAAGCAACAATCATAATGGATTCCCTGTGATAGATCATGGAAGAAATGGGGAGGCACTTGTGATTGGGCTCGTTCTTCGAAGTCATCTTTTGGGGCTTCTTTTGTCGAAGGAAGATTTCCAGCATAGTCCTCTGCCTTCCGATCAAAGGGGATCCAGGCCAATCAGGCATAATTTGAGTGAGTTTGTGAAACCTGCTTCCAGTAAAGGCTTATCTATAGATGATATACATCTAAGCTCAGATGACTCAGAAATGTACATAGATCTTTTCCCATTTTTGAATCCCTCTCCATACATCGTTCCAGAAGACATGTCTTTGACGAAGGTATATAATCTTTTCAGGCAGCTAGGTCTAAGACATATATTTGTTGTCCCTCGTCCTTCGCGCGTTGTTGGTTTAATTACCAGGAAGGATTTGTTGATTGAGGATAATGACGATTCAGACACAGTGGAACTCCAATCGACCAGTGTAAGGTCTCTATGA 2313 42.5 MLANHLQNGIETAKLVWSRLPDAEDGELDEVGISKKSDRCSVESLDYEVIENYAYWEEQSQRGRLLVGYYVVVKWLFALLIGIGTGLAAVFINISVENFAGWKFALTFSIIQKSYFAGFLVYVLINLVLVFSSVYIITHFAPAAAGSGIPEIKGYLNGVDIHGVLFFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFGELLPMAIIGVIGGLLGALFNQLTLYITYWRRNFLHKKGNRVKQIIEACIISFVTSIISFGLPLLRKCSPCPVVDADSGIECPRPPGMYGNYVNFYCSKDNEYNDLATIFFNTQDDAIRNLFSAKTFHEFSAQSLLTFLVMFYSLAVVTYGTAVPAGQFVPGIMIGSTYGRLVGKLVVNFYHKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDTFNEGLYEEQAQLKGIPLLESRPKYQMRKIAAKDACGRRVVSFPRVVKVADVVEILRSNNHNGFPVIDHGRNGEALVIGLVLRSHLLGLLLSKEDFQHSPLPSDQRGSRPIRHNLSEFVKPASSKGLSIDDIHLSSDDSEMYIDLFPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLIEDNDDSDTVELQSTSVRSL 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5516404 5526312 - Bpe015499.1 Bpe04g00839 102648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00839 770 ProSiteProfiles CBS domain profile. 703 759 IPR000644 -
Bpe04g00839 770 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 4 769 - -
Bpe04g00839 770 Pfam Voltage gated chloride channel 130 553 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 4 769 - -
Bpe04g00839 770 SUPERFAMILY Clc chloride channel 52 575 IPR014743 -
Bpe04g00839 770 SMART cbs_1 593 645 IPR000644 -
Bpe04g00839 770 SMART cbs_1 706 754 IPR000644 -
Bpe04g00839 770 Gene3D - 575 756 IPR046342 -
Bpe04g00839 770 PRINTS Chloride channel signature 469 489 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Chloride channel signature 560 574 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Chloride channel signature 522 541 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Chloride channel signature 504 520 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe04g00839 770 PRINTS Plant CLC chloride channel signature 48 56 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe04g00839 770 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe04g00839 770 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe04g00839 770 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe04g00839 770 PRINTS Plant CLC chloride channel signature 421 437 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe04g00839 770 Pfam CBS domain 587 645 IPR000644 -
Bpe04g00839 770 Pfam CBS domain 704 750 IPR000644 -
Bpe04g00839 770 ProSiteProfiles CBS domain profile. 590 650 IPR000644 -
Bpe04g00839 770 SUPERFAMILY CBS-domain pair 579 750 IPR046342 -
Bpe04g00839 770 CDD CBS_pair_voltage-gated_CLC_euk_bac 594 750 - -
Bpe04g00839 770 Gene3D Clc chloride channel 67 574 - -
Bpe04g00839 770 CDD ClC_6_like 43 573 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00839 Bpe05g00733 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00839 Bpe-Chr4:5516404 Bpe11g01498 Bpe-Chr11:11105088 0 dispersed
Bpe04g00839 Bpe-Chr4:5516404 Bpe05g00733 Bpe-Chr5:20807724 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00839 K05016 - jre:109005860 1327.38