Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00842 ATGACTATGGCGATGCTCTTGAGCATTGTCGTTGTCGTCATCCTTATGCTGCTTCTGATTCTCATCATCATCCTCTTCGCCTGCAAGCCATGGCGCTTTCTTTCCACTTCTCGTTCGCGTACGCTCAAGGCCTCTGACCTGGAGAGGCCCCTTGTTGAGGACAATGTGGATTCTCAAGATCAAAGCAACGAACTTCCAAGGGATTATGATTTGGAGGGAGCTTTTCAATCTGATGTGCATTACCGCTCCCCGGGAGCACATGGACTCATTTACAAACAAAGGCTTCCAGCTGCATCTCCAGAAAATTATATACTCCTGGTTCTTGATGTATACGCAGATTCTTTAGAAGACATTTCTGTTGGCCAGACACTTAAACGTCCATATGATGCACACCAGATTTCAGAAATCCAAAGACCTAGTAAGAGGGTTTTAAATGAAAAATCTGAAGAGTCATCGGAAAAGGAAATCTTACACCAAAGAAGTCGCATTTCTTTGGAGGTTATTTCTGGTCCTTCTCGCGGACTTAGATCTTTCATACATTCATCAAGTACCTCTAGGCTTCCTCTAACTATTGGAAGGGTTTCTCCTAGTGATATTGTACTAAAGGATTCAGAGGTCTCAGGGAAGCATGCATTAATAAATTGGAATTTAAATAAAATGAAATGGGAGCTGTTGGACATGGGTAGCATGAATGGAACACTGCTTAATTCTCAACCGATACACCATCCTGACTCTGGAAGTAGGCATTGGAGTGATCCTACTGAACTTGCGAGTGGAGATATAATAACACTTGGTACAACCTCAAAAATATATGTTCATATAACTTCTCAAACTGAGGGTATAATTCCATTTGGAGTTGGTGTTGCATCTGATCCCATGGCTATGCGTCGAGGAGGAAAAAAATTGGTTATGGAAGATGTCTTTTATTATAAGTGGCCTCTTCCTGGAATCAATCAGTTGGGAATATTTGGAATTTGTGATGGTCATGGTGGATCAGCAGCTGCCAAAAGTGCTAGCGAAATTCTACCTGAGATGGTTGCCACTATTTTATCTGATTCTCTAAAAAGGGAACGGGTATTTTCCTTATGTGACGCATCAGATGTTTTAAGGGATGCATTTTCTCGGACAGAAGTGTGCATGAATCATCACTATGAGGGTTGTACTGCAACCTTGCTTCTGGTATGGGTGGATGGTAACGATAATTACTTTTTGCAATGCGCAAATGTTGGCGATTCTGGTTGTATTGTAAGTGTTGATGGGAAACAAGTAAAGATGACTGAAGATCATAGAGTTACTAGCTACTCAGAACGACAACGAATTGAAAAATTAGGAAAGCCATTGAAAGATGGGGAGACACGATTATGTGGTTTGAACCTTGCACGGATGCTTGGAGACAAATTTCTGAAACAGCAGGATAATCGCTTCAGTTCAGAGCCTTACACAAGTCAAGTTGTACATATTGACCAAGCAAGCAGGGCATTTGCACTCTTGGCAAGTGATGGCTTTTGGGATGTCATCAGCGTCAAGAAGGCAATCCAGCTAGTTCTTCAGGGTCAGGAGAGATACTCTACAGATTCAGAAAATTTGGCCGAGAAGATAGCTAATTTTTTGTTGGCTGAGGCTAGAATGCTACGAACAAAGGATAATACCACTATAATTTACTTAGATTTTGACTCCTCGCATAGAAACTCTTGTAAAGTTGAATCATAA 1710 41.4 MTMAMLLSIVVVVILMLLLILIIILFACKPWRFLSTSRSRTLKASDLERPLVEDNVDSQDQSNELPRDYDLEGAFQSDVHYRSPGAHGLIYKQRLPAASPENYILLVLDVYADSLEDISVGQTLKRPYDAHQISEIQRPSKRVLNEKSEESSEKEILHQRSRISLEVISGPSRGLRSFIHSSSTSRLPLTIGRVSPSDIVLKDSEVSGKHALINWNLNKMKWELLDMGSMNGTLLNSQPIHHPDSGSRHWSDPTELASGDIITLGTTSKIYVHITSQTEGIIPFGVGVASDPMAMRRGGKKLVMEDVFYYKWPLPGINQLGIFGICDGHGGSAAAKSASEILPEMVATILSDSLKRERVFSLCDASDVLRDAFSRTEVCMNHHYEGCTATLLLVWVDGNDNYFLQCANVGDSGCIVSVDGKQVKMTEDHRVTSYSERQRIEKLGKPLKDGETRLCGLNLARMLGDKFLKQQDNRFSSEPYTSQVVHIDQASRAFALLASDGFWDVISVKKAIQLVLQGQERYSTDSENLAEKIANFLLAEARMLRTKDNTTIIYLDFDSSHRNSCKVES 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5542024 5547861 - Bpe015502.1 Bpe04g00842 102651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00842 569 CDD PP2Cc 293 557 IPR001932 -
Bpe04g00842 569 Pfam FHA domain 190 265 IPR000253 GO:0005515
Bpe04g00842 569 Gene3D - 290 566 IPR036457 -
Bpe04g00842 569 PANTHER PROTEIN PHOSPHATASE 2C 70 35 568 - -
Bpe04g00842 569 SUPERFAMILY PP2C-like 298 558 IPR036457 -
Bpe04g00842 569 CDD FHA 162 276 IPR000253 GO:0005515
Bpe04g00842 569 ProSiteProfiles Forkhead-associated (FHA) domain profile. 189 240 IPR000253 GO:0005515
Bpe04g00842 569 SMART FHA_2 188 240 IPR000253 GO:0005515
Bpe04g00842 569 SMART PP2C_4 279 555 IPR001932 -
Bpe04g00842 569 ProSitePatterns PPM-type phosphatase domain signature. 322 330 IPR000222 GO:0043169
Bpe04g00842 569 SUPERFAMILY SMAD/FHA domain 162 273 IPR008984 GO:0005515
Bpe04g00842 569 Gene3D - 158 289 - -
Bpe04g00842 569 PANTHER PROTEIN PHOSPHATASE 2C 35 568 IPR015655 GO:0004722|GO:0006470
Bpe04g00842 569 Pfam Protein phosphatase 2C 294 549 IPR001932 -
Bpe04g00842 569 ProSiteProfiles PPM-type phosphatase domain profile. 285 557 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00842 Bpe05g00909 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00842 Bpe-Chr4:5542024 Bpe02g00524 Bpe-Chr2:3410677 5.32E-20 dispersed
Bpe14g01235 Bpe-Chr14:9273118 Bpe04g00842 Bpe-Chr4:5542024 5.99E-06 transposed
Bpe04g00842 Bpe-Chr4:5542024 Bpe05g00909 Bpe-Chr5:22108113 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00842 K01090 - mnt:21390736 780.4