Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00843 | ATGAGTGCAAACCAGGCGGCCAATAGCAGCGCCGGATCAGGCGGCAGTGGTAGCTCCGGATCAGGCGGTGGAGGTCCTTGCGGAGCTTGTAAGTTTCTGCGCAGAAAGTGCGTGCAGGGGTGCATATTCGCTCCGTACTTCGATTCAGAGCAAGGCGCCGCCCATTTCGCAGCGGTTCACAAGGTGTTCGGCGCAAGCAATGTGTCCAAGCTCCTCCTGCATCTTCCAGTCAACAAGCGACTCGATGCTGTCATAACCATTTGTTACGAGGCTCAAGCTCGCTTAAGAGATCCTGTTTATGGCTGCGTCTCTCACATCTTTGCCCTTCAACAGCAGGTAGTGAATCTACAAGCTGAGCTCTCCTACTTACAAGCACAACTAGCAACCCTCGAGCTCCCGTTGCCGCCTCCACCGCCACCGCCTCCGCCATCTCTACTCACTCCGCTGCCGCTCTCCATCGCCAACCTCCCTTCGTCTGCCTCCATTCCCGCCTCGTATGACTTGTCGACTCTTTTCGATCCGGTGGTTCAACCAACTTGGACAGTCCAACACCGGTTGGTTGAACCTCGTCCATTTGGGTCCAGCAGCAGCCCAGCCACGGTCAGCGGTGGTGGGGGTGATCTTCAGGCATTGGCTAGAGAACTTCTTGATAGACATGGCGGTTCAACACCATGCAGTAATGACTCAACTTCTCCATCCCTTTCGAAATGA | 711 | 55.41 | MSANQAANSSAGSGGSGSSGSGGGGPCGACKFLRRKCVQGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHLPVNKRLDAVITICYEAQARLRDPVYGCVSHIFALQQQVVNLQAELSYLQAQLATLELPLPPPPPPPPPSLLTPLPLSIANLPSSASIPASYDLSTLFDPVVQPTWTVQHRLVEPRPFGSSSSPATVSGGGGDLQALARELLDRHGGSTPCSNDSTSPSLSK | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5563744 | 5565593 | + | Bpe015504.1 | Bpe04g00843 | 102652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00843 | 236 | MobiDBLite | consensus disorder prediction | 189 | 236 | - | - | |
Bpe04g00843 | 236 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 221 | - | - | |
Bpe04g00843 | 236 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - | |
Bpe04g00843 | 236 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bpe04g00843 | 236 | Coils | Coil | 106 | 126 | - | - | |
Bpe04g00843 | 236 | ProSiteProfiles | LOB domain profile. | 25 | 127 | IPR004883 | - | |
Bpe04g00843 | 236 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 18 | 1 | 221 | - | - | |
Bpe04g00843 | 236 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bpe04g00843 | 236 | Pfam | Lateral organ boundaries (LOB) domain | 26 | 124 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00843 | Bpe-Chr4:5563744 | Bpe05g00911 | Bpe-Chr5:22121456 | 1.48E-111 | dispersed | |
Bpe04g00843 | Bpe-Chr4:5563744 | Bpe05g00910 | Bpe-Chr5:22116210 | 2.37E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21274 | PF03195 | LOB | 4.00E-38 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00843 | K21994 | - | mnt:21405253 | 321.242 |