Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00846 ATGGAGCAAATCACAGCAAACAACCGATCGCTTCCGCCTCCTTTTCTCTCCAAAGATCTCCATCTCTATCCCTACCATCAATTTCAAAACCCCCACCAGAATTATTCCAATGAGAAGTATTCTGGTGGCGAAAGCAAAGAGCTTGGCAGAAGTGACGCCGGGGACGGAGAGATTATCAAAAGATCACGCGGCCGACCGGCTGGTTCTAAGAACAAGCCTAAGCCACCGATTGTAATCACACGCGACAGTGCAAACGCTCTCCGATCACTTGTCATGGAGATCGCTGCCGGTTCCGACGTGGTGGAGACGATGTCAGACTTTGCACGCCGGAGACAGCGGGGGGTTTGTATTTTGAGCGGAGGTGGGACAGTAAGCGACGTCACCTTAAGGCAGCCAGGTGTTACTTTACGCGGTGAATTCGAGATTCTTTCTTTGTCAGGATCGTTTTTGCCGCCCCCGGCTCCTGCCGAGGCCTCCGGACTAGCTGTGTATTTGGCAGGAGGACAAGGGCGAGTGGTCGGAGGGTGTGTCGTCGGACCACTTTTAGCTTCCACCCCGGTTGTTATAATGGCGGCTACTTTTGGAAACGCTGCATACGAGAGGCTTCCAATAGAGGAAGATGAATCGCCGATGAAAATCCAGGCGAGCAATCCCATCGGAAGAGGGCAGCAGCAAAATTTACTAGATCCAAACACTTCTCTATTTCATGGCGCTCATCAGAATCTTCTAAATCCATGTGAATTACCTTCTGAAGCATTCTTGCTTACAAATCGCCCTTCATATTAG 786 50.64 MEQITANNRSLPPPFLSKDLHLYPYHQFQNPHQNYSNEKYSGGESKELGRSDAGDGEIIKRSRGRPAGSKNKPKPPIVITRDSANALRSLVMEIAAGSDVVETMSDFARRRQRGVCILSGGGTVSDVTLRQPGVTLRGEFEILSLSGSFLPPPAPAEASGLAVYLAGGQGRVVGGCVVGPLLASTPVVIMAATFGNAAYERLPIEEDESPMKIQASNPIGRGQQQNLLDPNTSLFHGAHQNLLNPCELPSEAFLLTNRPSY 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5573272 5574057 + Bpe015507.1 Bpe04g00846 102655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00846 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 261 IPR014476 GO:0003680
Bpe04g00846 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 38 261 - -
Bpe04g00846 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 194 IPR005175 -
Bpe04g00846 261 MobiDBLite consensus disorder prediction 43 64 - -
Bpe04g00846 261 CDD DUF296 88 153 IPR005175 -
Bpe04g00846 261 Gene3D - 87 216 - -
Bpe04g00846 261 MobiDBLite consensus disorder prediction 29 77 - -
Bpe04g00846 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 208 - -
Bpe04g00846 261 ProSiteProfiles PPC domain profile profile. 84 217 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00846 Bpe-Chr4:5573272 Bpe14g00904 Bpe-Chr14:6741793 3.58E-87 dispersed
Bpe04g00846 Bpe-Chr4:5573272 Bpe11g00699 Bpe-Chr11:5379086 1.03E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00846 - - jre:108980480 331.257