Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00871 ATGGGTTGTTTTCCTTGTTTTGATTCGAGGGAGGAAGAAAAACTGAATCCGGAGAAAGAAAGTGACGATGGAAAGAGAGCGATACCGACGCTTCCCACTAACATTCCCCGATTGCCTTCTGGAGTGGAGAAATTAAAATTAAGAAGCAATGGTGTGCCGAAAAGAGAAAATCAGGGCTCTAAGGACAGCCCTGGAGTCAATATTGCTGCTCAAATATTTACTTTTCGAGAGCTTGCTTCTGCAACCAAAAATTTCAGACCAGAATGCTTTTTAGGAGAAGGAGGATTCGGCCGAGTGTACAAAGGACAGCTTGAGAGCACCGGTCAGGTCGTTGCAGTTAAACAGTTGGATCGAAATGGTCTTCAAGGGAATCGAGAATTTCTAGTGGAGGTGCTCATGCTTAGCCTTCTTCATCACTCAAACTTAATGAATTTAATTGGTTACTGTGCTGATGGGGATCAGCGGCTTCTTGTTTATGAGTTCATGCCTCTGGGATCATTAGAAGATCATCTTCATGACTTTCCACCTGATAAGGAACCCCTAGATTGGAACACGAGGATGAAAATAGCCGCCGGTGCAGCCAAAGGTTTGGAATACCTGCACGACAAAGCAAGCCCTCCGGTTATTTATAGAGATTTCAAGTCGTCCAACATATTGCTAGATGAAGGATTCCACCCGAAACTTTCAGATTTTGGTCTTGCCAAGCTCGGTCCTGTCGGAGATAAATCACATGTTTCTACTCGAGTTATGGGGACTTATGGCTATTGTGCACCAGAATACGCAATGACTGGACAGCTCACGGTCAAATCGGATGTCTACAGCTTCGGTGTAGTCTTCTTGGAGCTTATTACTGGCCGGAAAGCGATCGATAGCACCCGACCTCACGGAGAACAGAATCTTGTCACTTGGGCAAGGCCTTTGTTCAACGATAGAAGAAAATTTTCAAAACTGGCCGACCCTCTGTTGCAGGGGAGGTATCCAATGCGGGGGCTCTACCAGGCTCTGGCAGTGGCTTCTATGTGCATCCAGGAGCAGGCTGCCTCTCGACCTTTAATTGGAGATGTCGTTACGGCCCTTTCTTACCTAGCAAACCAGGCATACGATGGGAGTAGTGGGTACAGAGGGATTGTCGATAAGGACGACAAGAGGAGTAGAGATGAAAGAGGGAGGATATTGAAGAACGAGGAAGGAGGCAGCTCTGGACGCAAATGGGATTTGGAAGGATCTGAGAAAGAAGACTCCCCGAGAGAGGTTGGGAGGATTACACCGAGGGATTTGGAGAGAGAGCGGACTGTTGCTGAAGCCAAGATGTGGGGCGAGAATTGGCGAGAAAAGAGACGGCAAAGTGCACAAGGAAACTTCGAGGGGGCGAACGGATAG 1380 47.54 MGCFPCFDSREEEKLNPEKESDDGKRAIPTLPTNIPRLPSGVEKLKLRSNGVPKRENQGSKDSPGVNIAAQIFTFRELASATKNFRPECFLGEGGFGRVYKGQLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLMNLIGYCADGDQRLLVYEFMPLGSLEDHLHDFPPDKEPLDWNTRMKIAAGAAKGLEYLHDKASPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPLLQGRYPMRGLYQALAVASMCIQEQAASRPLIGDVVTALSYLANQAYDGSSGYRGIVDKDDKRSRDERGRILKNEEGGSSGRKWDLEGSEKEDSPREVGRITPRDLERERTVAEAKMWGENWREKRRQSAQGNFEGANG 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5800940 5803717 - Bpe015535.1 Bpe04g00871 102680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00871 459 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 453 - -
Bpe04g00871 459 MobiDBLite consensus disorder prediction 7 26 - -
Bpe04g00871 459 Gene3D Transferase(Phosphotransferase) domain 1 162 376 - -
Bpe04g00871 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bpe04g00871 459 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Bpe04g00871 459 MobiDBLite consensus disorder prediction 373 459 - -
Bpe04g00871 459 CDD STKc_IRAK 91 359 - -
Bpe04g00871 459 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00871 459 PANTHER OS07G0668900 PROTEIN 1 453 - -
Bpe04g00871 459 MobiDBLite consensus disorder prediction 374 450 - -
Bpe04g00871 459 SUPERFAMILY Protein kinase-like (PK-like) 63 359 IPR011009 -
Bpe04g00871 459 Gene3D Phosphorylase Kinase; domain 1 70 161 - -
Bpe04g00871 459 MobiDBLite consensus disorder prediction 1 64 - -
Bpe04g00871 459 Pfam Protein kinase domain 90 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00871 Bpe-Chr4:5800940 Bpe14g01144 Bpe-Chr14:8547672 0 dispersed
Bpe09g00183 Bpe-Chr9:1270733 Bpe04g00871 Bpe-Chr4:5800940 1.30E-163 dispersed
Bpe04g00871 Bpe-Chr4:5800940 Bpe15g01082 Bpe-Chr15:20012053 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63304 PF00069 Pkinase 3.50E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00871 K13430 - pvy:116140735 809.29