Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00872 ATGGAGAAGAAGCCACCTCGAAAGTACGTTAGCTTTTCAAGCCTCGGCGGCGAGGGAAGGAGGACCAGAGTGGTATCGCCCAGACTCAGTTTGGATGCCATTGATGAGAGATTCGACGACCCACTGCAGGCCGGAAATGGCGATGAGGAAGTTTCTGGGTCTGAATTGGATTCCACAAAAGCTGGAGTTTTTGAAGATGTTGATCTCTTCCTGCAAAGCTTGTCCGATTCCGACGTTGAAACTCTCGAGGTTCCTCGCTCCGTCGAATTGTTATACGAAATGGTCGATTCCACAATCAATAAGTACAACGAAACTCCAAGTGTTTCAATGTTTGGTCGGAATCCCGATCAAGACAATTCATTTTTCGAAGCCATAAATAGGGTTTCGACGATCTCAAATAAGCTTGCGCAATTTCCTTCGAATTCGAAGACATTGCCGTCGCCTGATCGAACCAGCGCCGTACTGCAACGGGTAATGGCCTTCTTGGAAGAAAGTCTACGCCTTCTCCTCGAGCCATCCAAAACCAGAGACCCAAATCGTAAACCGACGAAAACGCCGAAGCAATCGTCATTCCGTTCTAATAACGAGCCGTCCGATCACTGCGAATTACCCCACAGAGAATCTGGACTTGAGGAATACCCAGCGATTTCTGATGAAATCGTCTCCACCATTAACAGAATATGGAGAACGATGGTCTTCGCCAATTACGACCACGAATTCTGCATTACTTACGGCGTCCAGAGGCGAAGCGCTTTTAAAACTGCACTCAACGATCTCGGTTACGCCATTCTCAGCATCGATGACGTGCAGAAAATGCCATGGGAATCGCTCGAAGCTGAAATCGCAACGTGGGTAAACTGCGTTGAGAAGTGCCGCAATTTCCTTTTCTCCGGCGAGCGGCAGCTCGCCGATTCTGTTTTTGCCAATCACTTCTCGTTTTCTCACAACTTATTCGGCGAAATCGCTCGCGCCGTCGTTTTACGGCTTCTAAATTTCGTAGACGGCGTTGCGTTGACGAAGAGATCTGCAGAGAGGCTGTTCAAATTCCTAGATATGTACGAGGCGCTGCGTGATTTAATTCCGACAATTAAAGAATTTCCGGAAGATTTCGTGGACGAGCTGGTAGAAGAAACTGAACGGGTCAAAGCCCTAATTGGCGAAGCAGCGGTCAGTATTTTCTGCAATCTCGAAAACTCCATTAAAGCAGATAATGGAAGAATTCCGGTAGCCTCTGGCGCGGTTCACCCCTTAACGCGCTACGTGATGAACTACCTAAAATATGCGTGCGAGTATAAGAGCACTTTCGAGCAAGTATTTAACGAGCAATCCGCCATTGAAGGCAAGGTAAATTCTTGTTTTGGCGAACAGCTAACGACCGTCATGGAATTATTGGATAGCAACCTGGAAATGAAATCCAAGCTTTACAGAGACCCTTCGTTGAGGTACATTTTCTTGATGAACAATGGCAGATACATTCTGCAGAAAATCAAAGGGACGACCGAGATTCACGAATTAATGGGCGACACGTGGTGCCGGAAGCGATCCTCGAGCCTCCGTCAGTACCACAAAATCTACCAGCGAGAGACGTGGGGGAAGATCTTGCAATGTCTGAGCCACGAAGGTCTGCAAATAAACGGGAAGGTCTGCAAACCTGTTTTGAAGGAGAGGTTCAAGAGCTTTAACGCCATGTTTGAGGAAATTCACAAAACACAGAGCACGTGGGTAGTGAGCGACGAGCAACTTCAGTCGGAGCTCCGGGTTTCGATTTCGGCGGTGATGATTCCCGCTTACCGGTCTTTTTTAGGGAGGTTTAAGCAGTATTTGGATTCGGGAAGACAGAGTGAGAAGTACATAAAGTTTCAACCGGAGGACATTGAAAATTTGATCGAAGAATTCTTCGACGGGAATGCTCTGACAATGGCGAGAAGGAAAACGTAG 1938 47.42 MEKKPPRKYVSFSSLGGEGRRTRVVSPRLSLDAIDERFDDPLQAGNGDEEVSGSELDSTKAGVFEDVDLFLQSLSDSDVETLEVPRSVELLYEMVDSTINKYNETPSVSMFGRNPDQDNSFFEAINRVSTISNKLAQFPSNSKTLPSPDRTSAVLQRVMAFLEESLRLLLEPSKTRDPNRKPTKTPKQSSFRSNNEPSDHCELPHRESGLEEYPAISDEIVSTINRIWRTMVFANYDHEFCITYGVQRRSAFKTALNDLGYAILSIDDVQKMPWESLEAEIATWVNCVEKCRNFLFSGERQLADSVFANHFSFSHNLFGEIARAVVLRLLNFVDGVALTKRSAERLFKFLDMYEALRDLIPTIKEFPEDFVDELVEETERVKALIGEAAVSIFCNLENSIKADNGRIPVASGAVHPLTRYVMNYLKYACEYKSTFEQVFNEQSAIEGKVNSCFGEQLTTVMELLDSNLEMKSKLYRDPSLRYIFLMNNGRYILQKIKGTTEIHELMGDTWCRKRSSSLRQYHKIYQRETWGKILQCLSHEGLQINGKVCKPVLKERFKSFNAMFEEIHKTQSTWVVSDEQLQSELRVSISAVMIPAYRSFLGRFKQYLDSGRQSEKYIKFQPEDIENLIEEFFDGNALTMARRKT 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5805349 5807286 + Bpe015536.1 Bpe04g00872 102681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00872 645 MobiDBLite consensus disorder prediction 36 57 - -
Bpe04g00872 645 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 644 IPR004140 GO:0000145|GO:0006887
Bpe04g00872 645 Gene3D Exocyst complex component Exo70 103 643 - -
Bpe04g00872 645 MobiDBLite consensus disorder prediction 172 207 - -
Bpe04g00872 645 Pfam Exo70 exocyst complex subunit 283 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bpe04g00872 645 SUPERFAMILY Cullin repeat-like 97 634 IPR016159 -
Bpe04g00872 645 MobiDBLite consensus disorder prediction 1 23 - -
Bpe04g00872 645 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 47 644 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00872 Bpe-Chr4:5805349 Bpe05g00960 Bpe-Chr5:22485984 0 dispersed
Bpe04g00872 Bpe-Chr4:5805349 Bpe05g00959 Bpe-Chr5:22478535 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00872 K07195 - mnt:21400481 676.781