Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00902 ATGAAAATACAGTGTGATGTGTGCGAGAAAGCTCCGGCGACGGTGATTTGCTGCGCAGATGAGGCGGCGCTGTGTGCGAAATGTGACGTCGAAGTTCATGCAGCGAACAAGCTCGCAAGCAAGCACCAGAGGCTTCCTCTTCAATGCCTCTCCGGCAAGCTCCCCAAGTGTGACATATGCCAAGAAAAGACAGCTTTTATATTCTGTGTAGAAGATAGAGCCCTGTTTTGCGAGGATTGCGATGAGCCAATTCACTCGCGGGGAAGCCTTTCAAGAAACCACCAACGATTCCTAGCAACCGGAATCCGGGTAGCACTGAGCTCGAGTTGTTCAAAGGAGATGGAAAAGAGTTCGATGGAGCCTCCAAATCAGAAGAAACAACAGCTTTCTCCACAGCGGTCTAATATCGATTCATCCCCTTGGACTGTCGAGGACGTCCTCCGTTTATCAGAATTTGAAACCCCCTACAAGGCAAGAAATCTACTTCAGAAGGAGCAGCTCGAGTTTGGCGAGCTTGAATGGCTGGCGGAAATGGGTATTTTTGGGGAGCAGATTCCACAAGAGGCAATGACAGCAGCAGAAGTTCCTGAGCTTCCAAGATCACAGCCTAGCAACATCTCATACAGAACCACCAAATCGTCACCCCCTTTCAAGAAGCCTAGGATCGAGAATTTTGACGAAGACGAGGAGTACTTCATTGTTCCCGATCTTGGT 714 49.3 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLPLQCLSGKLPKCDICQEKTAFIFCVEDRALFCEDCDEPIHSRGSLSRNHQRFLATGIRVALSSSCSKEMEKSSMEPPNQKKQQLSPQRSNIDSSPWTVEDVLRLSEFETPYKARNLLQKEQLEFGELEWLAEMGIFGEQIPQEAMTAAEVPELPRSQPSNISYRTTKSSPPFKKPRIENFDEDEEYFIVPDLG 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6044861 6045833 + Bpe025668 Bpe04g00902 102711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00902 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bpe04g00902 238 MobiDBLite consensus disorder prediction 195 221 - -
Bpe04g00902 238 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Bpe04g00902 238 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Bpe04g00902 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bpe04g00902 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe04g00902 238 MobiDBLite consensus disorder prediction 113 137 - -
Bpe04g00902 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Bpe04g00902 238 Gene3D Classic Zinc Finger 1 95 - -
Bpe04g00902 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bpe04g00902 238 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 238 - -
Bpe04g00902 238 MobiDBLite consensus disorder prediction 198 214 - -
Bpe04g00902 238 CDD Bbox1_BBX-like 5 47 - -
Bpe04g00902 238 CDD Bbox1_BBX-like 56 98 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00902 Bpe05g00975 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00871 Bpe-Chr3:28466255 Bpe04g00902 Bpe-Chr4:6044861 6.90E-45 dispersed
Bpe04g00902 Bpe-Chr4:6044861 Bpe09g00270 Bpe-Chr9:2009553 3.07E-45 dispersed
Bpe04g00902 Bpe-Chr4:6044861 Bpe05g00975 Bpe-Chr5:22602529 5.02E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21284 PF00643 zf-B_box 6.90E-08 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00902 - - cit:102626697 347.436