Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00915 ATGTCTCAATCAGATCGTTACCGACCTAGATTGGTGATCAAGAAAGTTTTGGCTGAGCTTCAGCAGGAGGGAGATGGTGCTGTTGTTAGGAGAGGCATTGGAAGGAGTGATTTGAAGAACTTGGATCCATTCCTATTGTTGGATGACTTCTCAGTGGGTGCCCCTGCTGGATTTCCAGATCATCCGCACAGAGGTTCTAAATTTATCACCAGAGGAGGGATTACCCATCAAGACTTTGCGGGGCACAAGGGTACGATCTGGACAGGAGATGTGCAGGTTCAGTGGATGACGGCAGGTAGAGGGATCGTCCACTCCGAAATGCCAGCTGGTGGAGGAAGCCAAACTGGTTTGCAGCTTTGGATCAACTTATCATCCAAAGACAAAATGATTGAACCAAGATATCAAGAGCTCCTTAGTGAAGAAATTCCAAGATCAGAAAAAGACGGTGTCGAAGTTCGAGTTATCGCTGGAGAATCAATGGGTGTAAAGTCTCTGGTCTACACCAGAACTCCGACGATGTACCTTGATTTTACTCTAAAACTAAGAGCTCAAATGCATCAAAATATCCCAGAGTTGTGGAACTCATTTGTGTATATAATTGAAGGAGACGGTGTTTTTGGTATGTCAAATTCATCGCCGGTAGCTGCTCATCACATTCTCGTCTTGGGACCCAGAAATGGTCTAAGTGTGTGGAATAGGTCTTCAAAGACTCTGCGATTTGTGTTGATTGCTGGGCAACCATTGAACGAGTCTGTGGTTCAACATGGACCGTTTGTGATGAACACTCAAGATGAAATTGATCAAGCCATTGAAGACTATCATTTCTGCAAAAATGGGTTTGAAATGGCCAAGCATTGGAGATCCCAATTGAAGATCAGCTAG 882 44.56 MSQSDRYRPRLVIKKVLAELQQEGDGAVVRRGIGRSDLKNLDPFLLLDDFSVGAPAGFPDHPHRGSKFITRGGITHQDFAGHKGTIWTGDVQVQWMTAGRGIVHSEMPAGGGSQTGLQLWINLSSKDKMIEPRYQELLSEEIPRSEKDGVEVRVIAGESMGVKSLVYTRTPTMYLDFTLKLRAQMHQNIPELWNSFVYIIEGDGVFGMSNSSPVAAHHILVLGPRNGLSVWNRSSKTLRFVLIAGQPLNESVVQHGPFVMNTQDEIDQAIEDYHFCKNGFEMAKHWRSQLKIS 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6111048 6112696 - Bpe015579.1 Bpe04g00915 102724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00915 293 CDD cupin_pirin_C 171 247 - -
Bpe04g00915 293 Pfam Pirin C-terminal cupin domain 174 278 IPR008778 -
Bpe04g00915 293 Gene3D Jelly Rolls 143 248 IPR014710 -
Bpe04g00915 293 CDD cupin_pirin_N 27 123 - -
Bpe04g00915 293 Gene3D Jelly Rolls 23 274 IPR014710 -
Bpe04g00915 293 PIRSF Pirin 8 287 IPR012093 -
Bpe04g00915 293 PANTHER PIRIN-RELATED 8 291 IPR012093 -
Bpe04g00915 293 SUPERFAMILY RmlC-like cupins 10 288 IPR011051 -
Bpe04g00915 293 PANTHER PIRIN-LIKE PROTEIN 8 291 - -
Bpe04g00915 293 Pfam Pirin 30 121 IPR003829 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00915 Bpe-Chr4:6111048 Bpe08g01106 Bpe-Chr8:13107665 7.75E-126 dispersed
Bpe04g00915 Bpe-Chr4:6111048 Bpe05g00988 Bpe-Chr5:22685407 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00915 K06911 - mnt:21404588 469.929