Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00952 | ATGGCTCATATTCCGGCTAATCACGGGGCCTCCTCCGTTTCTCAACCGGAGACAGGTCTGGAAAAAGATGGTCTGTATTCGGAGCTATGGAAAGCCTGCGCAGGGCCTCTGGTAGATGTTCCTCGCCGAGGAGAAAGAGTTTTCTACTTTCCTCAGGGTCACTTGGAACAATTGGAAGCGTCAATAAATCTGGAGTTGAATCAGAAAATTCCCATTTGTGATCTACCCTCTAAGATTCTCTGTCGTGTCGTCGACACTCAATTGATGGCAGCAAAAGAAACGGACGAAGCTTACGCTCAGATCACTCTGCTCCCAGAACTAGATCAAACCGAGGCTTCAAGCCCGGAACCTGATCCCGTTGAGAATCCGAGAAGTTCTGTGCATTCGTTTTGCAAGATTTTAACGGCTTCAGATACGAGCACTCATGGCGGATTCTCAGTTTTACGTAAACATGCCACCGAATGCCTTCCTCTTCTGGACATGAGCCAACCGACGCCTACCCAAGAATTAGTTGCCAAAGATCTTCACGGGCATGAGTGGAAATTTAAGCATATTTACAGAGGTCAACCGCGGAGGCATTTGCTCACTACTGGATGGAGTACTTTTGTGACTTCCAAGAGACTACTTGCCGGGGACGCCTTCGTGTTTTTAAGGGGCAGTAATGGAGAGTTGAGAGTCGGGGTTTGTCGTCTTGCTCGACAACAGGCTCAGATGCCATCATCTGTGATATCCATTCACAACATGCATCTGGGAGTCCTTGCCACTGCATCTCATGCTTTTAGAACTCAGACCCTTTTTGTTGTCTATTACAAGCCCAGGACAAGCCAATTCATTATTGGTTTCAACAAATACCTAGACTCCATTAAGATTGGGTTTTCGATTGGGATGCGTTTTAAGATGCAGTTTGAAGGAGAGGAATCTTCGAAGAGAAGGTTCACGGGAACTATTGTTGGCATTGGAGACGTTTCTCCTCAGTGGTCCGATTCCAAATGGCGATCGTTGAAGGTTCAATGGGATGAGCCTTCTACTATTCCAAGGCCAGAAAGGGTCTCTTCTTGGGAGATAGAACATTTTGTGCCGCTCTCTTCGTTAAACTTGAGTCAACCTGTGACGAAAAGTAAAAGGGTCCGACCAGTTGAGATTCTAACGTCGGATTTAACTTCTGGTTCTCATGCTTCGCCATTTCGGTATCATGGATCATCTCTTCCCAACTATCATGGATCGACTCTTCCCAACGACATGCCCCAACTGCATAATGTTGCCGAAGTCCATCCGAGACGGACTGAAGTCGATGCCAGTCTTTCTAATGACAGTAAATTTTATGGCTCAAAATCTCAACCTGAAGCTAACTGGCCATCTTCTCCTCGTCTTAGTGTCTCTCTAAACCTTTTCACAAATTCGATAGATGACAAAGTATCTGACCAATCTGGATCCGTTCTCCCCGTCAATGTTTCTTCGACTTCACCGAATCCAAACAATGGCGGTCTTGTAAATAGTCAGTTGGATAATCAGCATACATCAGATGGTTCTGTTTGCTGCCGTTTGTTTGGAATCAATTTGTTAAAGAAATCGAACGGCAACTCAAATATGGAGAAACCCCCACCAAGCAAGCAGGGTAACAATTTGACGTGTAGAATTCGTACAAAGGTTCAAATGCAAGGCTACCCCATTGGTCGTGCTGTCGACTTAGCAGCTCTGCAAGGATATGAACATCTTATAGACGAGCTTGAGAACATATTCGACATTAAAGGAGAGCTTCTTCCACAAGACAAATGGGCAGTGGTCTTTACCGACAATGAGAATGACATGATGCTCGTGGGGGATGATCCATGGCCAGAATTCTGTAAAATGGTGAGAAAAATCTACATATTTTCGAGGGAAGAAGTCAAGAAGATGGGTTCGAAACTGGAGCATCCTCCATTATTGGCAACGTCGTCACTACAAGGTCGAGAGATTGTTAGAAGTTTGGAAACCGAGGAAAGCAAGAAAACTGAGTGA | 1998 | 45.35 | MAHIPANHGASSVSQPETGLEKDGLYSELWKACAGPLVDVPRRGERVFYFPQGHLEQLEASINLELNQKIPICDLPSKILCRVVDTQLMAAKETDEAYAQITLLPELDQTEASSPEPDPVENPRSSVHSFCKILTASDTSTHGGFSVLRKHATECLPLLDMSQPTPTQELVAKDLHGHEWKFKHIYRGQPRRHLLTTGWSTFVTSKRLLAGDAFVFLRGSNGELRVGVCRLARQQAQMPSSVISIHNMHLGVLATASHAFRTQTLFVVYYKPRTSQFIIGFNKYLDSIKIGFSIGMRFKMQFEGEESSKRRFTGTIVGIGDVSPQWSDSKWRSLKVQWDEPSTIPRPERVSSWEIEHFVPLSSLNLSQPVTKSKRVRPVEILTSDLTSGSHASPFRYHGSSLPNYHGSTLPNDMPQLHNVAEVHPRRTEVDASLSNDSKFYGSKSQPEANWPSSPRLSVSLNLFTNSIDDKVSDQSGSVLPVNVSSTSPNPNNGGLVNSQLDNQHTSDGSVCCRLFGINLLKKSNGNSNMEKPPPSKQGNNLTCRIRTKVQMQGYPIGRAVDLAALQGYEHLIDELENIFDIKGELLPQDKWAVVFTDNENDMMLVGDDPWPEFCKMVRKIYIFSREEVKKMGSKLEHPPLLATSSLQGREIVRSLETEESKKTE | 665 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6416456 | 6419741 | + | Bpe015616.1 | Bpe04g00952 | 102761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00952 | 665 | ProSiteProfiles | B3 DNA-binding domain profile. | 130 | 232 | IPR003340 | GO:0003677 | |
Bpe04g00952 | 665 | Pfam | AUX/IAA family | 514 | 630 | IPR033389 | - | |
Bpe04g00952 | 665 | Pfam | Auxin response factor | 256 | 335 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bpe04g00952 | 665 | SUPERFAMILY | DNA-binding pseudobarrel domain | 121 | 259 | IPR015300 | - | |
Bpe04g00952 | 665 | MobiDBLite | consensus disorder prediction | 472 | 502 | - | - | |
Bpe04g00952 | 665 | Pfam | B3 DNA binding domain | 130 | 230 | IPR003340 | GO:0003677 | |
Bpe04g00952 | 665 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 531 | 640 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bpe04g00952 | 665 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 9 | 526 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bpe04g00952 | 665 | SUPERFAMILY | CAD & PB1 domains | 536 | 621 | - | - | |
Bpe04g00952 | 665 | ProSiteProfiles | PB1 domain profile. | 545 | 626 | IPR000270 | GO:0005515 | |
Bpe04g00952 | 665 | Gene3D | - | 291 | 363 | - | - | |
Bpe04g00952 | 665 | SMART | B3_2 | 130 | 232 | IPR003340 | GO:0003677 | |
Bpe04g00952 | 665 | PANTHER | AUXIN RESPONSE FACTOR 11 | 531 | 640 | - | - | |
Bpe04g00952 | 665 | PANTHER | AUXIN RESPONSE FACTOR 11 | 9 | 526 | - | - | |
Bpe04g00952 | 665 | MobiDBLite | consensus disorder prediction | 434 | 456 | - | - | |
Bpe04g00952 | 665 | CDD | B3_DNA | 128 | 230 | IPR003340 | GO:0003677 | |
Bpe04g00952 | 665 | Gene3D | - | 127 | 231 | IPR015300 | - | |
Bpe04g00952 | 665 | Gene3D | - | 541 | 633 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe04g00952 | Bpe05g01038 | CCT | |
Bpe04g00952 | Bpe05g01038 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00952 | Bpe-Chr4:6416456 | Bpe13g00184 | Bpe-Chr13:9759644 | 1.39E-26 | dispersed | |
Bpe04g00952 | Bpe-Chr4:6416456 | Bpe05g01038 | Bpe-Chr5:22955782 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21288 | PF02309 | AUX_IAA | 1.20E-12 | CL0072 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00952 | K14486 | - | qsu:112005008 | 793.497 |