Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00969 ATGATGATTCTGAGAGGTTGTCAAGAGAAAATCACGGAGAAAAGCCAAGAGGAGGTGGATGAAGATGTGGAGGACGGTTCCTGTGCGGAGGTTGTCCGGTGGGAGAGGTTTCTTCCGAGGATGGTTCTTAGAGTTCTTCTAGTTGAAGCTGATGATTCCACGCGTCGGATTATCTCTGCACTTCTTCGTAAATGCAGCTATAGAGTTGCAGCTGTTTCTGATGGACTCAAGGCGTGGGAAACAATAAGGGCGAGACCTCACAGTATAGATATTATAATGACTGAGGTGGATTTGCCATCAATTTCTGGCTACGCCCTTCTTACTCTAGTAATGGAACATGAAGTTTGCAGAAACATTCCGGTTATAATGATGTCCTCTCAAGATTCAATCAGCACCGTCTTCAAGTACATGCTAAGAGGCGCCGGTGACTTTCTCATCAAACCTATTAGGAGCAATGAGCTGAGGAACATATGGCAGCATGTTTGGCGGAGGCAAAGTCTGCTTGGTGAGAAAACAACTTGTAAAGCTGTGGCATCTTTTGAGAATAATGCAGCGTGCAATTACTCAAGTGATTGTGGATCACCCAAAAAGAAACATAAACAATGCAGCGAGAAGGAGGTTGACACCCAAAGCTCTTGCACAACGCCTTACGTGGAAGCTGAGAGTGTGTACACCCCAAACATGCTGGACCCTACAAGTCTAAAGAGTGTAAGTTCTTCTAGTTTGAGCAACATGGGAGAGGCAGATCACAAGCCTAGTGGTGCATTGGAAAAAGAGATGTTCATATTTCATGGCAGAACTAGAGAAAACTTACATGGAGTAGTGTCAGAGTTTCCATTCTGTGATGAAGTCTATTTTGTTACTCCATCGAGATGGAAAGAAGACTGTGCTTCCATCCAAAGAATTGACAAGGATGGATTTGCAGGATCAGATATGCTTGTAGAAAATGAATTCTTCAGCAGTGAAGTAATTAGTTGTGATGATGAATGCAATGAACTTCCCTCTAGAGCTATTGACTTGATTGCCACAATTGATATTAAACCAAAGTTTGTTAAAGGAGGTTTTAGTTACGAAAAAGTAGAATCTACTCCTGATTTGGAATTTTCTTTGGGGAAAATGCATCCAAGTTCAAATGCTGAAGGGACTGATGAAATGAAACCACTGAACCATTCCAGTGCTTCAGCTTTTTCATTGTATACTAGCCGCAAGATATTGCAACCTTCTTTTCATGTCCCGTCAACTGATACGTGTAGACCAGATGGCGGACCTTGTAAATTCAAGGCACCGTCCTTGAATGAAATCTCTGAAAATGAATGCACTTTTCAAACTCAGGTTATGAGTCATGTAGGAAACGGAGCAACCCCAGTACTTGATGATTCTGATCAAATCGAATTGTCATTTACAGATCCCCAATTTGGAACAGTCCCAGTCGCAGATGGGAAGTTTGACAATGTAGTTGTTGGAGACAATCATGCAGTTCCATCCATGTTTTGTGCTCAATATGGTATACCCACAGGGTGGAATAGCAGAGAAGCCTGCAATGAAGGGACGGGAATCCTTAATAAACAAGCAGATCCCGAAACTACAAATAACTCAATGGAGCAGAGTGAGGTTGAGAGGAACGTAACAAAGCCTTCAGACCCACCAAGGCATAATTCTCCTGCTGCACCTCACAGTACCAACAGTACTTTATGTAATGAAACTTCAGATTACAACTGGCAGGAGGCAGTTGAAAAGACAGCACCCTTTGAGATTTCAAAAGACGGTCGTTTCTTCAGTCATGAAGGATTCAGCTGGCATCCCTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTGCATGAGCCAAAGGGAAGCAGCTTTAACAAAGTTCCAATTGAAGCGTAAAGATAGGTGCTATAGAAAAAAGGTTCGATACCAAAGCAGGAAAAGATTGGCTGAGCAGCGGCCTAGAATAAAGGGGCAGTTCGTGCGACAAATAAAAGCTTACCCACTAACCACCGAAGCAAGGTGTTGA 2019 43.09 MMILRGCQEKITEKSQEEVDEDVEDGSCAEVVRWERFLPRMVLRVLLVEADDSTRRIISALLRKCSYRVAAVSDGLKAWETIRARPHSIDIIMTEVDLPSISGYALLTLVMEHEVCRNIPVIMMSSQDSISTVFKYMLRGAGDFLIKPIRSNELRNIWQHVWRRQSLLGEKTTCKAVASFENNAACNYSSDCGSPKKKHKQCSEKEVDTQSSCTTPYVEAESVYTPNMLDPTSLKSVSSSSLSNMGEADHKPSGALEKEMFIFHGRTRENLHGVVSEFPFCDEVYFVTPSRWKEDCASIQRIDKDGFAGSDMLVENEFFSSEVISCDDECNELPSRAIDLIATIDIKPKFVKGGFSYEKVESTPDLEFSLGKMHPSSNAEGTDEMKPLNHSSASAFSLYTSRKILQPSFHVPSTDTCRPDGGPCKFKAPSLNEISENECTFQTQVMSHVGNGATPVLDDSDQIELSFTDPQFGTVPVADGKFDNVVVGDNHAVPSMFCAQYGIPTGWNSREACNEGTGILNKQADPETTNNSMEQSEVERNVTKPSDPPRHNSPAAPHSTNSTLCNETSDYNWQEAVEKTAPFEISKDGRFFSHEGFSWHPSHSHSHSHSHSHCMSQREAALTKFQLKRKDRCYRKKVRYQSRKRLAEQRPRIKGQFVRQIKAYPLTTEARC 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6618978 6622819 + Bpe015635.1 Bpe04g00969 102778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00969 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 ISOFORM X1 27 653 - -
Bpe04g00969 672 SMART REC_2 43 158 IPR001789 GO:0000160
Bpe04g00969 672 Pfam Response regulator receiver domain 45 157 IPR001789 GO:0000160
Bpe04g00969 672 Gene3D - 41 189 - -
Bpe04g00969 672 ProSiteProfiles CCT domain profile. 618 660 IPR010402 GO:0005515
Bpe04g00969 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 653 IPR045279 GO:0009736
Bpe04g00969 672 ProSiteProfiles Response regulatory domain profile. 44 162 IPR001789 GO:0000160
Bpe04g00969 672 MobiDBLite consensus disorder prediction 520 539 - -
Bpe04g00969 672 MobiDBLite consensus disorder prediction 520 566 - -
Bpe04g00969 672 Pfam CCT motif 618 660 IPR010402 GO:0005515
Bpe04g00969 672 SUPERFAMILY CheY-like 43 175 IPR011006 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00969 Bpe05g01054 CCT
Bpe04g00969 Bpe05g01054 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00969 Bpe-Chr4:6618978 Bpe15g01310 Bpe-Chr15:21341436 3.69E-15 dispersed
Bpe04g00969 Bpe-Chr4:6618978 Bpe05g01054 Bpe-Chr5:23071790 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21291 PF00072 Response_reg 2.10E-18 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00969 K12130 - qsu:112004762 503.056