Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00972 | ATGGATTTTTTGCCAAAAGCAAAAGCGTATTCTGATAGAGAGGAGGAAGAGGAAGAAGAAGAGGTAAAAAGTAGTTCTTCTGCTAGCAAGCTTCCATTTTCTCCTGGCTCTTCATCTTCTCCTTCTGTATATAAGCTATGGCTAGGGAATAGTGAGTCTAAAGAGAAAGTTTCAAGATCTTATCGTATGAATGAACTTTCTTCACCCGAAACCCCCATTAACTGCCACGAGAAGCTTGAGTCGATAGACTTATCGTTGCGAATCGACAGCGACATGGGCGGGGATGTCAATGGAGCTCGAAGCTATGGCCATGGAGGTTGCAGCGAAAGAGAACACATGTTTGATAAAGTAGTGACTCCCAGCGATGTTGGAAAGCTAAATCGTCTAGTAATTCCGAAACAACACGCAGAGAAATACTTCCCCATCGATTCTTCAACAAATGAAAAGGGTTTGATTCTGAATTTTGAAGATAGAAACGGAAAATCATGGCGGTTTCGTTACTCTTACTGGAACAGTAGCCAGAGCTACGTGATGACAAAAGGATGGAGTAGGTTTGTGAAGGAGAAGAAGCTAGACGCCGGGGATGTCGTTTCTTTCGAACGGGGAGTGGGAGAGGTTGGAAAGCATCGTCTCTTCATAGACTGGCGGCGCCGCCCAGATGCGCCACCGAATCTGGCGTCGCTTGTTCATCTTCCTCAGTCTATGAGATGGGGTAGTAGACAGTTGATTCCTCCATCAATGGCGTCGCCTTATCCTCATCCGTACCGCCATTTTCAAAACCTTAATTACGGTACGATCAATCCGTCTTACTATCAGAGAGGAGCTTCCGACCACTTCCATGGAGGAAGCTTCGAATCGGGTCCTGTTTATTACTTAAGGCCGTCTTCTTCTTACACCATCGGAGCACTGCAACAAGGTGGGGAAGCTGCTCCAATGGTGATCGATTCAGTACCAGTAGCCCACCAAGGAAAATCTAAACCTAAACGCCTAAGACTGTTTGGTGTGAATTTGGAGTGTCCAGTACCAGAAGAACCCATTAATAATCCTCATTTTGCAAGCTCTTCTTCAGTTCCTTATGTTCAATTGCGGCCGCCATTTTCAACTGAGTTCTCAGCAAGAGGAAAAGGTTCGTCCTCGTTCGATTGGAATCTGCCATGA | 1158 | 45.68 | MDFLPKAKAYSDREEEEEEEEVKSSSSASKLPFSPGSSSSPSVYKLWLGNSESKEKVSRSYRMNELSSPETPINCHEKLESIDLSLRIDSDMGGDVNGARSYGHGGCSEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPIDSSTNEKGLILNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFERGVGEVGKHRLFIDWRRRPDAPPNLASLVHLPQSMRWGSRQLIPPSMASPYPHPYRHFQNLNYGTINPSYYQRGASDHFHGGSFESGPVYYLRPSSSYTIGALQQGGEAAPMVIDSVPVAHQGKSKPKRLRLFGVNLECPVPEEPINNPHFASSSSVPYVQLRPPFSTEFSARGKGSSSFDWNLP | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6672978 | 6674135 | + | Bpe015638.1 | Bpe04g00972 | 102781 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00972 | 385 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 | 68 | 353 | - | - | |
Bpe04g00972 | 385 | ProSiteProfiles | B3 DNA-binding domain profile. | 114 | 219 | IPR003340 | GO:0003677 | |
Bpe04g00972 | 385 | CDD | B3_DNA | 112 | 201 | IPR003340 | GO:0003677 | |
Bpe04g00972 | 385 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 68 | 353 | IPR044800 | GO:0003700 | |
Bpe04g00972 | 385 | MobiDBLite | consensus disorder prediction | 26 | 44 | - | - | |
Bpe04g00972 | 385 | SUPERFAMILY | DNA-binding pseudobarrel domain | 110 | 220 | IPR015300 | - | |
Bpe04g00972 | 385 | Pfam | B3 DNA binding domain | 114 | 218 | IPR003340 | GO:0003677 | |
Bpe04g00972 | 385 | SMART | B3_2 | 114 | 219 | IPR003340 | GO:0003677 | |
Bpe04g00972 | 385 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Bpe04g00972 | 385 | Gene3D | - | 107 | 224 | IPR015300 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe04g00972 | Bpe13g00799 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00972 | Bpe-Chr4:6672978 | Bpe08g00913 | Bpe-Chr8:11582969 | 2.95E-92 | dispersed | |
Bpe08g00492 | Bpe-Chr8:3216966 | Bpe04g00972 | Bpe-Chr4:6672978 | 6.54E-06 | dispersed | |
Bpe04g00972 | Bpe-Chr4:6672978 | Bpe11g00381 | Bpe-Chr11:2890171 | 6.50E-93 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21293 | PF02362 | B3 | 6.70E-30 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00972 | - | - | vvi:100259130 | 359.377 |