Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00994 ATGGCGTCGATTAGGTTCTTGGATTTGTCGGAAAACTCATTCTCAGGAAGCATTGAGGATGTTTTGTTTGAAAATTGTAGCTCCCTTCATTTTCTCTCTCTAGCCTCAAACAAGCTTGAAGGGCCCCTTCCCAGCTCACTGTCTGACTGTATTTTGCTGAATACTCTTAACCTGTCAATCAACCATTTTTCTGGACAGCCAGATTTTTCCTCAGGGATTCGGAAACTGAAAAGATTGAGGACGTTAGACTTTTCAAATAATGCATTTAAGGGGTTTGTTCATCAGGGAATATCATCCTTACACTTCTTGAAAGTTCTTCTCTTACACAAAAACCAGTTTTCAGGACCTTTACCTTCTGATATAGGACTGTGCCCCCACTTGGAAAAATTAGATTTTAGTGATAATCTTTTATCTGGGTCACTACCAAACTCCATGAGTTTACTGAATTCTCTGAGCTTCATCAGTTTATCGAATAATTCGTTAACGGGCGATTTCCCTAGGTGGATAGGCAGCATGGGAAGGTTAGAATATATCGACTTTTCGAGTAATAATATTGAAGGAGGCCTTCCATCTTCTATGGGAGGCCTGCAATTGCTATCTCATTTGAGTTTGTCAAAAAACAAACTGTCTGGTGGTATCCCTGCTTCACTAGTTGACTGTCGAAAGTTACATGTGCTCCGATTAGAAGGCAATGACTTCAATGGTAGCGTTCCGGATGGATTGTTTGAGCTTGGTTTGGAGGAGATTGATTTGTCGAATAATCGGCTTATTGGTTCGATCCCTGAAGGGTCGAGCGAACTCCATCAGTCTCTTCAAACGCTTGATCTATCAAAGAATAGTTTTACAGGAAAATTTCCTGCAGCAATGGGTCAGTTCATCAATTTAAGACACTTGAATTTGTCATGGAACAATCTTAAATCGAAGATTCAGCCAGACCTTGGATTGTTAGATCGACTATTGGTGCTGGACTTGAGAAGCAATGGCTTATATGGTTCGATTCCGTCAGACATTTGTGATTCAGAGAGCCTGCAAGTTCTTCAACTGGATGAAAATTCACTCACAGGATCAATTCCAGAAGAGATTGGAAACTGTTCCTCACTTAACTTGCTGAGCTTATCCGGCAATGGTTTGAGTGGATCGATTCCAAAGTCGATTTCGAATTTGAAAAAGCTCAAGATCCTTCAACTCGAACACAATAAATTAAGCGGGGAGATACCGAAAGAGCTCGGAATGTTAAACAACCTTATTGCTTTGAATGTATCGTACAACAGATTGATTGGCAGGCTTCCGGTTGGGGGTGTTTTCCAGAGCTTGGACCAGAGTGCTTTAATGGGAAATTTAGGAATTTGCTCTCCTTTACTGAAAGGACCCTGCAAGATGAATGTGTCTAAGCCACTCTTTCTTGATCCAGATGCTTATTCATACCAAATGGGTGGTCACAAGCAAAGAAACCGAAGTTCTGAATCCAAAAACTCAAATCCCCATGGTCTTCTCAGTGTTTCTGCAATTGTAGCCATTGCAGCAGCTATTTTGATTGCTGTTGGAGTGATCGTTATAAGCTTCCTTAACGTTTCAGTGCGAAGAAAGCTTGAATTTCTCGAAACGGCCATTGAAAGATCTTCGTTGTCTTCAAAATCAGGCAATGAACCAACTGGAAAGCTCATTCTGTTCGACTCGGATTCATCTCCAAACTGGGTCAGAAATCCCGAGTCGTTACTCAACAAGGCCTCCGAAATCGGTGGCGGAGTATTCGGAACAGTTTACAAGGTTTCGTTGGGAACTAAAGGACCAGTAGTAGCGATTAAGAAACTCGTTTCATCGAACTCGCCTCCAAATCCCGAAGAATTCGATCGAGAAGTTAGAATTCTGGCAAAAGCAAAGCATCCTAATCTGATATCAGTCAAGGGATACTACTTGAGCCCTCATACACAGCTTCTGCTCTCAGATTACGCCTCCAATGGCAGCCTGCAAGCCCTCCTGCACGAAAGGATTTCTGCGACACCACCTCTTTCTTGGCCCTTCCGACTGAAGATCATACACAGCACAGCCAAAGGACTCGCCTATTTACACCATTCCTTTCATCCACCGATCATTCACTACAGTCTAAGACCGAACAACATCTTGTTCGACGAGAACTACAGTCTAAAGATTTCAGATTTCGGCCATGCGAGGCTTCTGAACAAGCTCAACAAGCATGTGATAAACAGTAGATTTCAAAGCACTTGGGGCTATGTTGCGCCAGAATTGGCCTGTCAGAGCTTAAGGGTAAACGAAAAATGTGATGTATATTGCTTTGGAGTGATCATTCTCGAGCTCGTGACTGGTAAAAGACCAGTTGAATACGGAGAAGACAATGTTGTGATACTGAAAGACCATGTTCGGGTTTTGCTCGAGCATGGAAACGTTTTAGACTGTGTCGATCCAAGCATGAGGGAGTCAACCAATAATGAGGTGTTGCCTGTTCTTAAATTGGCCCTTGTCTGCACCTCTCAGTTACCTTCTAGCAGGCCTTCAATGGCGGAAGTGGTGCAGATACTAGAGGTTATTCAGGCCCCAGATTCTCAAAGGATGGATTTTGGAAATTCTATGAATCAGAATAGCGATTCTACTTAA 2613 42.63 MASIRFLDLSENSFSGSIEDVLFENCSSLHFLSLASNKLEGPLPSSLSDCILLNTLNLSINHFSGQPDFSSGIRKLKRLRTLDFSNNAFKGFVHQGISSLHFLKVLLLHKNQFSGPLPSDIGLCPHLEKLDFSDNLLSGSLPNSMSLLNSLSFISLSNNSLTGDFPRWIGSMGRLEYIDFSSNNIEGGLPSSMGGLQLLSHLSLSKNKLSGGIPASLVDCRKLHVLRLEGNDFNGSVPDGLFELGLEEIDLSNNRLIGSIPEGSSELHQSLQTLDLSKNSFTGKFPAAMGQFINLRHLNLSWNNLKSKIQPDLGLLDRLLVLDLRSNGLYGSIPSDICDSESLQVLQLDENSLTGSIPEEIGNCSSLNLLSLSGNGLSGSIPKSISNLKKLKILQLEHNKLSGEIPKELGMLNNLIALNVSYNRLIGRLPVGGVFQSLDQSALMGNLGICSPLLKGPCKMNVSKPLFLDPDAYSYQMGGHKQRNRSSESKNSNPHGLLSVSAIVAIAAAILIAVGVIVISFLNVSVRRKLEFLETAIERSSLSSKSGNEPTGKLILFDSDSSPNWVRNPESLLNKASEIGGGVFGTVYKVSLGTKGPVVAIKKLVSSNSPPNPEEFDREVRILAKAKHPNLISVKGYYLSPHTQLLLSDYASNGSLQALLHERISATPPLSWPFRLKIIHSTAKGLAYLHHSFHPPIIHYSLRPNNILFDENYSLKISDFGHARLLNKLNKHVINSRFQSTWGYVAPELACQSLRVNEKCDVYCFGVIILELVTGKRPVEYGEDNVVILKDHVRVLLEHGNVLDCVDPSMRESTNNEVLPVLKLALVCTSQLPSSRPSMAEVVQILEVIQAPDSQRMDFGNSMNQNSDST 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6938037 6940743 - Bpe015662.1 Bpe04g00994 102803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00994 870 ProSiteProfiles Leucine-rich repeat profile. 294 316 IPR001611 GO:0005515
Bpe04g00994 870 SUPERFAMILY Protein kinase-like (PK-like) 573 850 IPR011009 -
Bpe04g00994 870 ProSiteProfiles Protein kinase domain profile. 573 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00994 870 SUPERFAMILY L domain-like 3 241 - -
Bpe04g00994 870 ProSitePatterns Protein kinases ATP-binding region signature. 579 603 IPR017441 GO:0005524
Bpe04g00994 870 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Bpe04g00994 870 Gene3D Ribonuclease Inhibitor 215 464 IPR032675 -
Bpe04g00994 870 Gene3D Ribonuclease Inhibitor 1 214 IPR032675 -
Bpe04g00994 870 Pfam Protein kinase domain 575 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00994 870 PANTHER BNAA09G02190D PROTEIN 1 857 - -
Bpe04g00994 870 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Bpe04g00994 870 Pfam Leucine rich repeat 155 209 IPR001611 GO:0005515
Bpe04g00994 870 SMART LRR_typ_2 341 364 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 316 340 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 388 412 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 76 99 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 100 124 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 241 267 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 1 25 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 196 220 IPR003591 -
Bpe04g00994 870 SMART LRR_typ_2 292 315 IPR003591 -
Bpe04g00994 870 SUPERFAMILY L domain-like 172 441 - -
Bpe04g00994 870 Gene3D Phosphorylase Kinase; domain 1 562 650 - -
Bpe04g00994 870 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 857 - -
Bpe04g00994 870 Gene3D Transferase(Phosphotransferase) domain 1 651 858 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00994 Bpe-Chr4:6938037 Bpe04g01773 Bpe-Chr4:23305272 1.47E-22 dispersed
Bpe04g00994 Bpe-Chr4:6938037 Bpe07g00139 Bpe-Chr7:985173 6.07E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63307 PF00069 Pkinase 1.30E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00994 - - dzi:111307803 1067.37