Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01056 ATGTCACACACTTTACAGTCAAGAACATGTTTGCGAGATAGAGTTGCTTTAGTCTTAACCATTACGACTCTGCTAGTTTGTACTTCACAAGGGTTGAATCCTGAAGGGATGTTCCTCCTAGACTTAAAAGGTCATCTTCACGATGAGTTTGATCGTTTAAGAAACTGGAATTCATCTGATCAAACACCCTGTGGATGGATTGGTGTAAACTGCACTTCTGGTTATGATCCAGATGTGTGGTCTCTAGACTTGAGCTCGATGAATCTTTCTGGAACCTTAAGTCTCAGTATTGGCAACTTGATTCACTTAACTTATCTTAATGTTTCATACAATCAGCTCACGGGGGAAATACCCAAGGACATTGGGAATTGTACGATGTTAGAGTATCTTATACTAAATAATAATAACTTTGATGGGGAGATTCCATCTGAACTGGGAAAGCTGTCTTTCCTGGAGACTTTGAATATATGCAATAATAGAATCTATGGTCCTTTGCCAGACGACCTTGGAAACTTGTCTTCACTAGTTGAGTTAGTAGCATTTACAAATAATCTCACAGGTCCATTGCCTAGTTCTATTGGAAAGCTCAAGAATCTGAAGAGATTTAGAGCTGGTCAGAACGCTTTTTCCGGAAGCATCCCGGTTGAAATCAGTGGATGCAAGAGCTTGGAAGTTCTTGGTCTTGCCCAAAATCAAATTGAAGGCGAAATACCAAAAGAACTTGGTATGCTTGGAAGTTTGAAAGATTTGATTCTATGGAGCAACAAGTTGTCAGGGTCTATTCCGAAGGAAATTGGCAACTGTACAACCATTGAAACTCTTGCTCTATATGAAAATTATCTTGTGGGGCCCATACCAAAGGAAATTGGGACGATAAACTCTTTGAAGAAGTTGTACCTCTACAGAAATGGGTTGAATGGAACAATTCCAAAGGAAATTGGGAATCTTTCTCTTGCCATAGAGATTGATTTCTCTGAGAACTATTTAACTGGTGATATACCCTCTGAGTTCAGTAATGCCAAGGCTTTGCGCTTACTTTACCTTTTCCAAAACCAGCTGACTGGTGTTATACCAAATGAATTTAGCCGTTTGGTTAATTTAACAAAGCTTGACCTGTCGATTAATAACCTTACCGGGTCTATTCCATTTGGATTCCAGTATTTGACCGAATTGATTCAGTTGCAGCTTTTCAAAAATTTTCTGAGTGGAAATATTCCACAGGGTCTTGGACTTCACAGCAAAATTTGGGTTGTTGATTTTTCAGACAACAACCTGACAGGAAGGATACCTCCTCACATTTGTCATCACTCGAACCTGATCATATTGAATTTGGAGGCTAATAAGCTTGATGGAAATATCCCTACAGGGGTCTTGAATTGCCAATCATTGGTGCAACTACGACTAGTTGGAAACGAGCTTATTGGTGGCTTTCCATCTGAACTGTGTAACTTGGTGAATCTCTCTGCTATTGAATTAGATCAAAATAGATTTAATGGCTCAATTTCTCCGGCCATTGGAAATTGCCAAAAGTTGCAAAGGCTACACATTGCAAATAATTACTTCTCATCTAAACTGCCCAAGGAAATAGGAAATCTTTCTCAATTAGTCACTTTCAATGCTTCCTCTAACCTGCTAACAGGTCAGATTCCACCTGAAATCGTCAACTGTAAAATGCTCCAGCGTCTAGATCTTAGCAGCAATAACTTTGTGCATGCTTTACCAGCTGAAATTGGATCTCTTCTGCATCTGGAGATTCTCAAGCTCTCAGAAAATAAATTATTTGGAAATATCCCAGCAGAATTGGGAAAACTATCCCATTTGACAGAATTGCAGATTGGTGGCAATTTACTTTCAGGTGAAATACCTATGGAGTTAGGTTTCCTTTCAAGCTTGCAGATTTCAATGAATCTTAGTTATAATAAGCTTACAGGGAGAATACCTCTAGAGCTTGGTAATCTTAATATGCTGGTATTTCTTCTGCTTAATAACAATCGTTTGACGGGTCAAATTCCAAGCACATTTGACAACCTTTCAAGTTTATTGGGTTGCAACTTCTCCTACAATGACCTTTCTGGGCCAATACCTTCCAAACTACTGTTTCAGAACATGGATGTTACAAGTTTTATTGGCAACAATGGACTCTGTGGAGGACCTTTGGGCGATTGCCTTGGAGAGTTATCTTCTGGGTCCACTCCACCTTTTAAGAGTATCAACGCACCTCGAGGTAAAGTCATCACAGTGGTTGCTGCCGTGATTGGTGGAGTTTCTCTAGTTCTAATTGTAATTCTTTTGTATATAATGAGGTGTCCCCCGAAGACGGTTGTTTCTTTGCCAATCAAGGAGACCCGATCACCAAATTCAAACATCTATTTTCCTCCAAAGGAAGGATTCACTTTTCAAGATCTTGTCGTGGCCACAAGAAATTTTCACGATTGCTGTATTGTTGGAAAGGGTGCCTGTGGAACTGTCTACAAGGCAGTGATGCATCCTGGTCTGACCATTGCCGTGAAGAAGCTAGCATCAAACAGGGAGGGAAACAACGTAGAGAACAGCTTCCAGGCAGAAATTTTGACACTTGGAAATATTAGGCATCGAAACATTGTTAAGCTATATGGGTTTTGCTATCACAAGGGTTCTAATTTGCTCTTGTATGAGTATATGGCAAGAGGTAGTTTGGGCGAACTACTTCACAAGACCTCTTGCTGCTTGGAATGGCCGACTCGGTTTTCCATTGCCCTTGGTGCTGCTGAGGGCCTTGCTTACTTACATCATGACTGCAGACCAAAGATTATACATCGTGATATCAAGTCCAATAATATTCTACTCAATGAAAACTTTGAGGCCCGTGTTGGAGATTTCGGTTTGGCAAAAGTGATTGACATGCCTCAATCCAAGTCAATGTCAGCTGTTGCAGGATCATACGGATATATTGCTCCTGAATATGCATACACGATGAAGGTGACAGAAAAATGCGATATATACAGCTATGGAGTCGTTCTTCTGGAGTTGCTCACCGGAAAAACTCCTGTCCAGCCTCTAGAGCAGGGAGGCAACCTTGTATCGTGGACCTGGCATCATTATATTCGCACAAATCATTCATTAACGCATGAAATGCTTGATGACCGGTTAAATCTTGAAGATAACAGGACGGTTGATCACATGCTCGCCGTCTTAAAAATTGCGTTGATGTGCACGAGCATGTCACCTTTAGATCGACCGTCCATGCGAGAGGTTGTAACGATGCTTGTAGAGTCGAAAGAGGAGTGA 3267 40.77 MSHTLQSRTCLRDRVALVLTITTLLVCTSQGLNPEGMFLLDLKGHLHDEFDRLRNWNSSDQTPCGWIGVNCTSGYDPDVWSLDLSSMNLSGTLSLSIGNLIHLTYLNVSYNQLTGEIPKDIGNCTMLEYLILNNNNFDGEIPSELGKLSFLETLNICNNRIYGPLPDDLGNLSSLVELVAFTNNLTGPLPSSIGKLKNLKRFRAGQNAFSGSIPVEISGCKSLEVLGLAQNQIEGEIPKELGMLGSLKDLILWSNKLSGSIPKEIGNCTTIETLALYENYLVGPIPKEIGTINSLKKLYLYRNGLNGTIPKEIGNLSLAIEIDFSENYLTGDIPSEFSNAKALRLLYLFQNQLTGVIPNEFSRLVNLTKLDLSINNLTGSIPFGFQYLTELIQLQLFKNFLSGNIPQGLGLHSKIWVVDFSDNNLTGRIPPHICHHSNLIILNLEANKLDGNIPTGVLNCQSLVQLRLVGNELIGGFPSELCNLVNLSAIELDQNRFNGSISPAIGNCQKLQRLHIANNYFSSKLPKEIGNLSQLVTFNASSNLLTGQIPPEIVNCKMLQRLDLSSNNFVHALPAEIGSLLHLEILKLSENKLFGNIPAELGKLSHLTELQIGGNLLSGEIPMELGFLSSLQISMNLSYNKLTGRIPLELGNLNMLVFLLLNNNRLTGQIPSTFDNLSSLLGCNFSYNDLSGPIPSKLLFQNMDVTSFIGNNGLCGGPLGDCLGELSSGSTPPFKSINAPRGKVITVVAAVIGGVSLVLIVILLYIMRCPPKTVVSLPIKETRSPNSNIYFPPKEGFTFQDLVVATRNFHDCCIVGKGACGTVYKAVMHPGLTIAVKKLASNREGNNVENSFQAEILTLGNIRHRNIVKLYGFCYHKGSNLLLYEYMARGSLGELLHKTSCCLEWPTRFSIALGAAEGLAYLHHDCRPKIIHRDIKSNNILLNENFEARVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPLEQGGNLVSWTWHHYIRTNHSLTHEMLDDRLNLEDNRTVDHMLAVLKIALMCTSMSPLDRPSMREVVTMLVESKEE 1088
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7837449 7841048 + Bpe015725.1 Bpe04g01056 102865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01056 1088 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Bpe04g01056 1088 SMART LRR_typ_2 244 268 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 100 124 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 653 676 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 364 387 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 580 604 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 532 556 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 292 316 IPR003591 -
Bpe04g01056 1088 SMART LRR_typ_2 148 172 IPR003591 -
Bpe04g01056 1088 SUPERFAMILY Protein kinase-like (PK-like) 785 1082 IPR011009 -
Bpe04g01056 1088 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Bpe04g01056 1088 Gene3D Transferase(Phosphotransferase) domain 1 887 1088 - -
Bpe04g01056 1088 Gene3D Ribonuclease Inhibitor 386 728 IPR032675 -
Bpe04g01056 1088 Pfam Protein kinase domain 813 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01056 1088 SUPERFAMILY L domain-like 45 401 - -
Bpe04g01056 1088 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 5 1087 - -
Bpe04g01056 1088 SMART serkin_6 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01056 1088 SUPERFAMILY L domain-like 383 720 - -
Bpe04g01056 1088 Gene3D Ribonuclease Inhibitor 285 385 IPR032675 -
Bpe04g01056 1088 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Bpe04g01056 1088 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1087 - -
Bpe04g01056 1088 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515
Bpe04g01056 1088 Pfam Leucine rich repeat 324 377 IPR001611 GO:0005515
Bpe04g01056 1088 Gene3D Phosphorylase Kinase; domain 1 773 886 - -
Bpe04g01056 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Bpe04g01056 1088 ProSiteProfiles Protein kinase domain profile. 809 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01056 Bpe-Chr4:7837449 Bpe05g01131 Bpe-Chr5:23612290 0 dispersed
Bpe07g00139 Bpe-Chr7:985173 Bpe04g01056 Bpe-Chr4:7837449 7.02E-19 dispersed
Bpe08g01082 Bpe-Chr8:12931670 Bpe04g01056 Bpe-Chr4:7837449 3.24E-38 dispersed
Bpe15g00465 Bpe-Chr15:16030371 Bpe04g01056 Bpe-Chr4:7837449 9.15E-148 dispersed
Bpe02g00068 Bpe-Chr2:532109 Bpe04g01056 Bpe-Chr4:7837449 3.68E-19 transposed
Bpe03g00077 Bpe-Chr3:1240646 Bpe04g01056 Bpe-Chr4:7837449 1.68E-16 transposed
Bpe03g00294 Bpe-Chr3:3991704 Bpe04g01056 Bpe-Chr4:7837449 2.79E-98 transposed
Bpe04g01423 Bpe-Chr4:20905984 Bpe04g01056 Bpe-Chr4:7837449 9.83E-26 transposed
Bpe06g00288 Bpe-Chr6:13933085 Bpe04g01056 Bpe-Chr4:7837449 3.95E-150 transposed
Bpe06g00346 Bpe-Chr6:14988060 Bpe04g01056 Bpe-Chr4:7837449 6.79E-07 transposed
Bpe09g00056 Bpe-Chr9:386261 Bpe04g01056 Bpe-Chr4:7837449 0 transposed
Bpe10g00236 Bpe-Chr10:8793021 Bpe04g01056 Bpe-Chr4:7837449 1.97E-43 transposed
Bpe10g00895 Bpe-Chr10:14659708 Bpe04g01056 Bpe-Chr4:7837449 3.01E-11 transposed
Bpe12g00332 Bpe-Chr12:7409826 Bpe04g01056 Bpe-Chr4:7837449 2.89E-14 transposed
Bpe13g00534 Bpe-Chr13:12615834 Bpe04g01056 Bpe-Chr4:7837449 0 transposed
Bpe15g00005 Bpe-Chr15:1181124 Bpe04g01056 Bpe-Chr4:7837449 1.52E-18 transposed
Bpe15g00642 Bpe-Chr15:17206332 Bpe04g01056 Bpe-Chr4:7837449 3.37E-102 transposed
Bpe04g01056 Bpe-Chr4:7837449 Bpe05g01126 Bpe-Chr5:23594152 2.66E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63309 PF00069 Pkinase 5.60E-48 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01056 - - pvy:116137913 1590.86