Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01058 ATGGTTATTCAATTGAAACAAGAGTTGATTGTGAATAGCTTTAAAACTATTGATGGTCGTGGGGTCAACGTCCACATTGCAAATGGAGCTTGTATTACCATCCAATATGTCACTAATGTTATTATCCACGGCCTGCACATTCATGATTGCAAGCCCACTGGTAATGCCATGGTGAGGAGCTCGCCAAGTCATTACGGGTGGAGGACAATGGCCGATGGTGATGGCATCTCCATTTTCGGGTCTAGCCATATATGGGTTGATCACAATTCGCTCTCTCATTGCGCTGATGGCCTTGTTGATGCTGTGATGGGCTCAACTGCAATTACAATTTCAAACAATCACTTCACCCACCACAATGAGGTGATGCTGTTAGGCCACAGTGATTCGTATACAAAAGACAAGCAAATGCAAGTTACCATTGCTTTTAACCATTTTGGTGAAGGACTCATCCAGAGAATGCCAAGGTTGTGTAGACATGGATATTTCCATGTGGTGAACAATGACTACACTCACTGGGAAATGTACGCTATTGGTGGAAGCGGTAACCCAACCATCAACAGCCAGGGCAACAGATATGCAGCTCCAACAAACCCTTTTGCGAAAGAGGTGACAAAGAGGGTCGAAACTGCCCAAAGTGAGTGGAAGAATTGGAATTGGAGATCAGAGGGAGACCTGTTGTTGAATGGTGCATACTTCACTCCATCTGGTGCTGGAGCTTCTTCAAACTATGCCAGGGCCTCAAGCTTGGGAGCTAAGTCTTCTTCCATGGTTGGATCCATAACATCCAGTGCCGGTGCTCTTCCTTGTCGTAGAGGCCATCAATGCTAG 828 45.77 MVIQLKQELIVNSFKTIDGRGVNVHIANGACITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVMLLGHSDSYTKDKQMQVTIAFNHFGEGLIQRMPRLCRHGYFHVVNNDYTHWEMYAIGGSGNPTINSQGNRYAAPTNPFAKEVTKRVETAQSEWKNWNWRSEGDLLLNGAYFTPSGAGASSNYARASSLGAKSSSMVGSITSSAGALPCRRGHQC 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7873781 7874906 - Bpe015727.1 Bpe04g01058 102867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01058 275 Pfam Pectate lyase 7 190 IPR002022 -
Bpe04g01058 275 Gene3D - 1 268 IPR012334 -
Bpe04g01058 275 PANTHER OS04G0137100 PROTEIN 1 272 - -
Bpe04g01058 275 PRINTS Pollen allergen Amb family signature 8 24 IPR018082 -
Bpe04g01058 275 PRINTS Pollen allergen Amb family signature 246 269 IPR018082 -
Bpe04g01058 275 PRINTS Pollen allergen Amb family signature 153 172 IPR018082 -
Bpe04g01058 275 PRINTS Pollen allergen Amb family signature 175 194 IPR018082 -
Bpe04g01058 275 PRINTS Pollen allergen Amb family signature 72 93 IPR018082 -
Bpe04g01058 275 PRINTS Pollen allergen Amb family signature 217 241 IPR018082 -
Bpe04g01058 275 SUPERFAMILY Pectin lyase-like 1 275 IPR011050 -
Bpe04g01058 275 PANTHER PECTATE LYASE 18-RELATED 1 272 IPR045032 GO:0030570
Bpe04g01058 275 SMART amb_all 1 198 IPR002022 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01058 Bpe14g01295 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01058 Bpe-Chr4:7873781 Bpe09g00408 Bpe-Chr9:6572920 0 dispersed
Bpe04g01058 Bpe-Chr4:7873781 Bpe01g00340 Bpe-Chr1:2143751 1.53E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01058 K01728 - tcc:18602793 540.806