Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01077 ATGGGGAAGAACGCTTTGCTTCCAACCCTCGGAGACTTCACCAACAAGGACAATTGGGACAAATTCTTCGCCCTCCGCGGCCCCGACGACGCCTTTGAATGGTACGCTGAGTGGGACGAGCTCAGCCTCCAACTCCTTCCCCTCCTCTCTCAATCCCCGAATCCTCAAATTCTAGTTCCCGGCTGTGGAAATTCCCTACTCTCCGAACACCTTTATGATGCCGGATTTTGCTCCATTACTAACATTGACTTCTCCAAAGTGGCTATTTCCGGTATGTTGCGCCGCAACGTTCGTCATCGTCCAGATATGAGGTGGAGAGTCATGGATATGACCAGTATGCAGTTCTTGGATGGCACCTTTGACGCTGTTCTTGATAAAGGTGGATTAGATGCTTTGATGGAGCCAGAAGTTGGCAGTAAGCTGGGAAATCAATACTTATCTGAGGTCAAAAGAGTCGTAAAATCTGGGGGAAAGTTCATTTGTCTTACTTTGGCAGAATCTCATGTTCTAGCATTGCTCTTTTCAAAATTCCGTTTTGGGTGGAAACTGAATGTTGCTTCCATACCTCAAAAGCCATCGAGTAAACCTAACTTTCAGACATTTATGGTAGTCGCTGAGAAATATGAATCCAGTTCTATTTACCAAATACTTTCTAATGTCAATCATTCTCCTGTTAGTTGTAATGGAAATCAGACATATGGTCTCCATGAAGCTATCGAGAAGGAAAATAGAATCCGGGAAGAATATGCCAATGGTTCTGATCTTTCATACCCTCTTGAAGACCTTGAACTTGGAGCAAAAGGTGATTTGAAGATTCTTCAACAAGGGCATCGGTTTAAACTTATTTTGGGTGGACAAGGGGCCTCCCTTTTCAGCTACCGAGCAGTTCTTCTTGATGCCCAGGAACATTTTGGCCCATTTTCTTATCAATATGGAGTTTTCATAGTGCCAAAGGCTCGAGCTCATGAATGGTTATTCTTGTCAGAAGAAGGGCAATGGATGGTTGTTGAAAGCTCAAAGTCAGCTCGTTTAGTAATGGTGTTTTTAGACAAGAGCCACTCTAATAGTAGCATGGACATTATTCAGAAAGATTTATCTCCCCTGGTTAAACAATTGGCGCCTGGGAAAGATGTCATGGAGACCCAAATTCCTTTCATGATGGCAAGTGATGGGATCAAGCGGCGCAACATCATTCACCAGGCAACATCTTCACTAACAGGGCAAATAGTCGTTGAGGATGTAGTTTATGAAAATTCTAGTGGCAATGCTAGTTGCCTTTTTCTATCTGAAGAGTTGATATTCCGGCGTCTCATGTTTCAAAGAACTGAGGGTCTGGTGCAATCGGAAGCTTTACTAATTAAGGAAGGGACTTCTGAGAATGTCGATGATGAGACAAGGAGGAAGAAAAATTCTTCATCCTCTAAATATAAAAATAGAGGTCAACGACAGACAGAGCAAAGCGACCATCTGAAGGTGTATCATGACTATTTGGCAAGTTCTTATCACACGGGTATCATTTCTGGGTTTATGCTAATTTCTTCATTCATGGAAAGTGCGGCATCATCCGGAAAGACCGTCAATGCCGTTGTTATTGGTCTTGGAGCAGGTTTATTACCCATGTTTCTTCATGCTTGCATGAGCTTTTTGCACATTGAGGTTGTGGTGGAGTTAGATCCAACTATCTTGACTTTAGCTAGGGATTACTTTGGTTTTTCCGAGGATGAACATTTGAAGGTGCATATTGCCGATGGGATTCAATTTGTTAGAGAGCTAAAAGGTTCTGAAAAAACTGAGAATGGGCTTGCTTTGCCATTGTCCAATGGAAATTGTGATTCTCTTAGCACAGCAGGCAGAGGGACAACAAAGATTGACATACTTATTATTGATGTGGATTCTTCTGACTCAAGTTCTGGAATGACCTGCCCTGCTGCTGACTTTGTGGAGGAATCATTTCTTCAAACAGTGAAGAATACCCTTTCTGAACAGGGGCTCTTCATTGTTAATTTGGTCACGCGGTCTCCTGTGATTAATGATATGGTTGTTTCAAGGATGAAAACGGTCTTTGGCCAACTTTATGGCCTCCAGCTTGAAGAAGACGTCAATGAAGTATTGTTTGCTCTTCCATCAGAATCCTGCAAAAATGATGGCTCTTTCTCTCAAGCCTCTCTTCGACTTGAGAAACTCTTGGAGCTTAAACACCCTGAGATAAATCTAAGCATTATGGAGGCCACGAAGAAGATCAGATGTTTGAAATAG 2256 42.69 MGKNALLPTLGDFTNKDNWDKFFALRGPDDAFEWYAEWDELSLQLLPLLSQSPNPQILVPGCGNSLLSEHLYDAGFCSITNIDFSKVAISGMLRRNVRHRPDMRWRVMDMTSMQFLDGTFDAVLDKGGLDALMEPEVGSKLGNQYLSEVKRVVKSGGKFICLTLAESHVLALLFSKFRFGWKLNVASIPQKPSSKPNFQTFMVVAEKYESSSIYQILSNVNHSPVSCNGNQTYGLHEAIEKENRIREEYANGSDLSYPLEDLELGAKGDLKILQQGHRFKLILGGQGASLFSYRAVLLDAQEHFGPFSYQYGVFIVPKARAHEWLFLSEEGQWMVVESSKSARLVMVFLDKSHSNSSMDIIQKDLSPLVKQLAPGKDVMETQIPFMMASDGIKRRNIIHQATSSLTGQIVVEDVVYENSSGNASCLFLSEELIFRRLMFQRTEGLVQSEALLIKEGTSENVDDETRRKKNSSSSKYKNRGQRQTEQSDHLKVYHDYLASSYHTGIISGFMLISSFMESAASSGKTVNAVVIGLGAGLLPMFLHACMSFLHIEVVVELDPTILTLARDYFGFSEDEHLKVHIADGIQFVRELKGSEKTENGLALPLSNGNCDSLSTAGRGTTKIDILIIDVDSSDSSSGMTCPAADFVEESFLQTVKNTLSEQGLFIVNLVTRSPVINDMVVSRMKTVFGQLYGLQLEEDVNEVLFALPSESCKNDGSFSQASLRLEKLLELKHPEINLSIMEATKKIRCLK 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8293116 8300532 + Bpe015749.1 Bpe04g01077 102886

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01077 751 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 523 710 IPR029063 -
Bpe04g01077 751 MobiDBLite consensus disorder prediction 458 486 - -
Bpe04g01077 751 Gene3D Vaccinia Virus protein VP39 11 221 IPR029063 -
Bpe04g01077 751 CDD AdoMet_MTases 57 161 - -
Bpe04g01077 751 Pfam Methyltransferase domain 59 161 IPR013216 GO:0008168
Bpe04g01077 751 Gene3D Vaccinia Virus protein VP39 476 733 IPR029063 -
Bpe04g01077 751 PANTHER EEF1A LYSINE AND N-TERMINAL METHYLTRANSFERASE 11 714 - -
Bpe04g01077 751 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 11 714 - -
Bpe04g01077 751 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 165 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01077 K25166 EEF1AKNMT, METTL13; eEF1A lysine and N-terminal methyltransferase [EC:2.1.1.-] - csv:101211869 978.008
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01077 Bpe-Chr4:8293116 Bpe15g01354 Bpe-Chr15:21599768 1.16E-25 dispersed
Bpe11g01231 Bpe-Chr11:9195266 Bpe04g01077 Bpe-Chr4:8293116 4.17E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g950 . . Bda03g01134 . Bpe04g01077 . . . . . . . . . Sed02g1516 Cpe08g00405 . Bhi01g00216 Tan10g0506 Cmetu06g0645 Lac12g2024 Hepe05g1769 . Lcy11g1784 . . . . . . . . Cone15ag0259 . . Lsi05g01851 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe04g01077 Bpe_Chr04 FPKM 12.896024 12.696261 30.086267 31.147198 144.667007 143.57341 145.634827 32.70541 30.205391 30.465559