Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01103 ATGAATCTGAATCAAGGCAAGGGATCTATGCCGACAGCTAGCTCTAGTACTGTTCTAAAATCCGGCGAATTTGTTTCCGACCAATTTCCGGCGGGTCTTCGAGTTCTGGTCGTCGATGACGATCCGACCTGCCTGAGGATCTTGGAGAAGATGCTTCAATTTTGTCTCTACGATGGTATTCTTTTTCCAGTTACTGAAAATGATTACTTAATGACATTCATTTCAGTTACTAAATGCAATCGAGCGGAGATTGCGTTGTCTAAGCTTCGAGATAACAAAAACGGCTTTGATGTTGTAATTAGCGATGTCCACATGCCAGATATGGATGGGTTTAAGCTCTTAGAACACATTGGCCTAGAAATGGACTTGCCCGTTATCATGATGTCAGCTGATGAAGGGAAAGACGTCGTCATGAAGGGTGTGACTCACGGTGCTTGTGATTATCTAATAAAACCCGTTCGAATTGAGGCTTTGAAGAACATATGGCAACATGTAGTGCGGAGGAAGAAGAATGAGTGGAAGGATCTAGAACAATCTGGAAGTGTGGAAGATGGCGATAGGCTACAGAAAAATTGTAACGAAGTGGACTACTCATCCTCAGCAAATGAAGGAAATTGCAAAAACTCAAAGAGGAGGAAGGACGATGAAGAAGAAGCAGAGGAACGAGAAGATTCATCCACATTGAAGAAGGCACGTGTTGTTTGGTCGGTCGAGCTTCATCAACAGTTTGTTGCTGCCGTCAATCAACTAGGCATTGAAAAGGCTGTTCCTAAGAAAATTTTAGAGTTGATGAATGTTTCGGGACTCACTCGAGAAAATGTTGCCAGTCATCTTCAGAAATATCGTTTGTATCTGAGAAGGCTAAGTGGAGTTTCACCACACCCGAGTAATTTGAACAATTCTTTCATGACCCCACAAGAAGCAATGTTTGGACCGATTTCAGCACTCAATGGGATTGATCTTCAGGCACTTGCTGTTGCTGGAAAACTCACACCCCAAAGTCTTGCCTCGCTTCAAGCTTCCGGGCTTGGTAGATCTTCGCCTAAATCCAGCATAATTTCTGATCAGAGGAACATTTTTAGCTTTGAAAATCCAAAATTAAGATTTGGTGATTCCCAGCCTCAGCATGTCAACAGTAGTAAACCAATAAATTTACTCCATGGAATCCCCACCACTATGGAAGCAAAGCAGCTTGCAAATTTGAGCCAATCTCATGGAGGCATGAACATGCAAGGAAACGTCCATGGAGGCCAATCCAACTCTTTATTAACGCAGATGGCACAACCTCAATCATCAATCAGGCAGTCGATCAGAATACCTGGTGGGGTTTTGACAAACAATCTCCCTCCACCAGAAACTTCTATGTTCAATTTTCCAATGAACCAAACAGCCGACTTTCCAGGAAATAGTTTGCCTTTTCAAACAGCTCCAGCTATTGTTAGTCCTCCATCTAAAGGGCCATTCCTTGAAGAATCAAATCTAGAAATAAAACAATCGGGAAGATTTGTGTCAAGTTATGATGTATTTGAGGACTTGCACGAACAGAAATCTCAGGATTGGAACTTGCAGCATCCCAGCTTGAACTTCAATCCCTCTCATGGGGACCTGGATATCTCTTCTTCAGGTTTATATAATCAAAACTTTGCCAATGGCCCAAGGATTATACAGGAAATCAATGTTTCTGCGACTCGGCATGAGAATGGACAGATTGGTGGACAGCAACTGAATTCTATACTTTCTGACAATCCAGTAAAGGTCAAAGCTGAGACAATTCCAGATCCTAGTTGTGTCTTGTTTCCGGAAAACTTTGACGGTGATGATCTAATGAGTACCCTTTTGAGACAAGTTAGTTTCCTGCTACTTTTCATGTTTTGTTTTTTTTTTTTTGTGTTTTGCTTCCTTGGAAAATTTACTCAGATTCTGTTTATTTCCAGCAACAAGAAAATTTTGGACCAAGCTCCACCGAAAGCGAATATGACTTTGACAGGTATTCGATGGATAATATTCCCGTTTAAAACAAACACCATTTTGTGTTTTGATAGTCTGTTGTACATAGTTGTAAAATTAGAATCCTGGCAGAAAATTATTCTTTTTATGAACTCAAATCGTTGCTTTGGGTATCCACGAAGGAACATGTAA 2139 41.14 MNLNQGKGSMPTASSSTVLKSGEFVSDQFPAGLRVLVVDDDPTCLRILEKMLQFCLYDGILFPVTENDYLMTFISVTKCNRAEIALSKLRDNKNGFDVVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEGKDVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRRKKNEWKDLEQSGSVEDGDRLQKNCNEVDYSSSANEGNCKNSKRRKDDEEEAEEREDSSTLKKARVVWSVELHQQFVAAVNQLGIEKAVPKKILELMNVSGLTRENVASHLQKYRLYLRRLSGVSPHPSNLNNSFMTPQEAMFGPISALNGIDLQALAVAGKLTPQSLASLQASGLGRSSPKSSIISDQRNIFSFENPKLRFGDSQPQHVNSSKPINLLHGIPTTMEAKQLANLSQSHGGMNMQGNVHGGQSNSLLTQMAQPQSSIRQSIRIPGGVLTNNLPPPETSMFNFPMNQTADFPGNSLPFQTAPAIVSPPSKGPFLEESNLEIKQSGRFVSSYDVFEDLHEQKSQDWNLQHPSLNFNPSHGDLDISSSGLYNQNFANGPRIIQEINVSATRHENGQIGGQQLNSILSDNPVKVKAETIPDPSCVLFPENFDGDDLMSTLLRQVSFLLLFMFCFFFFVFCFLGKFTQILFISSNKKILDQAPPKANMTLTGIRWIIFPFKTNTILCFDSLLYIVVKLESWQKIILFMNSNRCFGYPRRNM 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8822631 8825353 + Bpe015778.1 Bpe04g01103 102912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01103 712 Gene3D - 33 183 - -
Bpe04g01103 712 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 230 283 IPR006447 GO:0003677
Bpe04g01103 712 MobiDBLite consensus disorder prediction 206 225 - -
Bpe04g01103 712 MobiDBLite consensus disorder prediction 194 225 - -
Bpe04g01103 712 PANTHER TWO-COMPONENT RESPONSE REGULATOR 452 602 - -
Bpe04g01103 712 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 431 - -
Bpe04g01103 712 PANTHER TWO-COMPONENT RESPONSE REGULATOR 452 602 IPR045279 GO:0009736
Bpe04g01103 712 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Bpe04g01103 712 CDD REC_typeB_ARR-like 35 166 - -
Bpe04g01103 712 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 229 286 IPR017930 -
Bpe04g01103 712 Pfam Myb-like DNA-binding domain 232 282 IPR001005 -
Bpe04g01103 712 SMART REC_2 33 162 IPR001789 GO:0000160
Bpe04g01103 712 Pfam Response regulator receiver domain 35 160 IPR001789 GO:0000160
Bpe04g01103 712 ProSiteProfiles Response regulatory domain profile. 34 166 IPR001789 GO:0000160
Bpe04g01103 712 SUPERFAMILY CheY-like 32 172 IPR011006 -
Bpe04g01103 712 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 431 IPR045279 GO:0009736
Bpe04g01103 712 Gene3D - 227 289 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01103 Bpe05g00823 CCT
Bpe04g01103 Bpe13g00682 CCT
Bpe04g01103 Bpe13g00682 ECH
Bpe04g01103 Bpe05g00823 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01103 Bpe-Chr4:8822631 Bpe08g00654 Bpe-Chr8:6676192 6.53E-102 dispersed
Bpe13g01332 Bpe-Chr13:18565463 Bpe04g01103 Bpe-Chr4:8822631 1.39E-14 dispersed
Bpe13g00682 Bpe-Chr13:13506862 Bpe04g01103 Bpe-Chr4:8822631 0 wgd
Bpe04g01103 Bpe-Chr4:8822631 Bpe05g00823 Bpe-Chr5:21502106 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21310 PF00072 Response_reg 2.20E-17 CL0304 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01103 - K14491 qlo:115994534 748.814