Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01108 TTCATTACATCAGCAGACTTGGATGTGGGGAACATTATGGAGGAAGCAAAAATGAGATGGCTACGACCAAATGAAATTCATGCTATACTCTGTAATCACAAATACTTCAGCATCAAGGTCAAGCCAGTGCACTTGCCCCCAGGTACAATTTTAAGATTGTTGTTATATTGTTGTGGCACTATAGAGTTATTTGATCGCAAGATGCTTAGGAACTTCAGGAAAGATGGTCATAACTGGAAAAAGAAAAAGGATGGGAAGACCGTTAAAGAAGCACATGAACATCTGAAGGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGACAGGATACTCCAACCTTCGTCCGCAGGTGTTATTGGCTACTTGATAAGAGTCTGGAACACATAGTTCTTGTTCATTATCGTGAAACTCAAGAGTTGCAGGGTTCTCCAACAAACCCAGTAAATTCTAATTCTAGTTCTGTCTCTGACCATTCTGCCTCTTGGCGTTTTTCGGAAGAACTAGATTCTGAGACTAACCAAACTCTATATGTTGGTGAAAATGAACTTCTAGCAGAGTGTAGGAATAAGTTAACTGCGAAGCATTATGAGCAAAGACTTCATGAAATTAACACGCTTGAATGGGATGAGCTTCTTGTAACAGATGATCTTTCCAACACACCTAAAGGAGGTTTTCACCAACAGAATCAAGTTGCGGCAAATGATTCCACTGTTGGAGGAGGCAACACGTTGTTGGAGGAAATTTCTACGTTTGACAATGTCAGTGGATCAATTGGGAGAAATAACACAAATCATTTTGGTTTGCCAAATAGCTCCTACATATCTACTATGGTAAGTCAATTAAATTCAAATGCGCAGAAAGGGAATATCATTGCAATGGCCTCCAATGTACCCTTAGATATTATGGCCAACGAGGGGTTGCAAAGTCAGGATAGCTTTGGGCAGTGGATAAATGATATTATCTCTGTCTCTCCTGGTTCTGTAGATGATCCAGTTTTTGACTCCTCCATTTTGCCTCATTATGATGAATTTACCTCTGCTACGATAAATCATCAACCATCTTCTGTGCCAGAGCAAATGTTTACCATAACTGATATCTCTCCTGGATGGGCATTTACTGCAGAAAAAACCAAGATTTTAATAACTGGATTTTTTCATGAAGAGTTTGCTCATCTGGCTAAGTCCAGTTTGTTGTGTCTCTGTGGCGATGTTTGTATTCCTACAGAAGTCGTTCAACTTGGAGTTTATCGTTGCCTGGTACCTCCACATCCACCTGGATGTGTAAATATCTATCTCAGTTTAGATGGTCATAAACCAATCAGCCAAGTTATGAATTTTGAGTATCGCAACCAATTATTGGATGGTTCAGGAGTTTCTTTAGACGAAAAGGAAAGGTGGGAGGAGTTTGAAGTTCAAATGCGGCTTCTTGGTTTGCTTTTCTCTGCATCGAAGAGCCTGAACATTCTGTCTAGTAAAGTATCACAAAATGGCTTGAAGGTAGCAAGAAACTTTGCTCAAAAAACATCTAACATTGCTAATAGTTGGGCTTATTTGCACAAGTCAATTCAAGATAACAAAATTTCATTTCCTCTAGCAAAAGATGGCCTATTGGAACTTATTTTAAGGAACAGAGTAAGGGAATGGCTGTTAGAAAGGATTATTGAAGGCTCCAAGAAGAGCACTGAATTTGATGCTTACGGTCAAGGAGTAATACACTTGTGTGCCATCCTGGGGTATTCATGGGCTATACAATTATTTGCTTGGTCAGGTTTAACATTGGATTTTCGGGACAAATCTGGATGGACAGCTCTTCACTGGGCAGCGTATTGTGGAAGGGAGAAAATGGTTGCAGTTCTTCTATATGCCGGGGCAAAGCCAAACTTGGTCACAGACCCAACCTCAGAAAATCCTGGAGGATGCACAGCTGCTGATCTTGCATATGTTAAGGGTCATGATGGCTTGGCTGCCTATCTTTCAGAAAAGGCTTTAGTAGCTCATTTCCAGGAAATGAGTATAGCTGGAAATATAAGTGGTACACTGCAAATCAACGCAACTGACATGGAGAGTGTAAACTCTGAGAATCTCAGTGAGGAGCAGCTATATATGAAAGATACTTTGGCAGCCTACAGAACCGCTGCCGATGCAGCAGCACGTATAAATGCTGCATTTCGCGAGCATTCTTATAAGCAAAGAACTAAAGAAGTTCAGGTTTCTACTCCAGAAATGGAAGCGCGAAATATTATTGCAGCTATGAAAATTCAGCATGCATTCCGCAATTATGAAATGCGTCGAAAAATGGCAGCTGCTGCTCGTATACAACACAGATTCCGTACTTGGAAAATGCGTAAAGATTTCCTTAACATGCGACGTCAAGCTATAAGAATTCAAGCTGCATTTCGAGGCTTCCAAGAACGGAGGCATTACCGTAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGCTATACTACGGTGGCGCTTAAAGAGAAAAGGCTTTCGTGGGCTTCAGGTTGAACCTTTGGAACCAATTGCAGAGGTAAGAGAGGAAAGTGATACCGAGGAAGACTTTTACCGTACAAGCCAGAAACAAGCAAGTGAACGTGTTGAGAGATCTGTTGTACAAGTTCAGGCCTTGTTTCGTTCAAGGAAAGCACAAGAAGACTATAAGAAAATGAAGATGGCCCATCTGGAAGCAATGGTAAGGAACACACCCTGA 2721 40.94 FITSADLDVGNIMEEAKMRWLRPNEIHAILCNHKYFSIKVKPVHLPPGTILRLLLYCCGTIELFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDTPTFVRRCYWLLDKSLEHIVLVHYRETQELQGSPTNPVNSNSSSVSDHSASWRFSEELDSETNQTLYVGENELLAECRNKLTAKHYEQRLHEINTLEWDELLVTDDLSNTPKGGFHQQNQVAANDSTVGGGNTLLEEISTFDNVSGSIGRNNTNHFGLPNSSYISTMVSQLNSNAQKGNIIAMASNVPLDIMANEGLQSQDSFGQWINDIISVSPGSVDDPVFDSSILPHYDEFTSATINHQPSSVPEQMFTITDISPGWAFTAEKTKILITGFFHEEFAHLAKSSLLCLCGDVCIPTEVVQLGVYRCLVPPHPPGCVNIYLSLDGHKPISQVMNFEYRNQLLDGSGVSLDEKERWEEFEVQMRLLGLLFSASKSLNILSSKVSQNGLKVARNFAQKTSNIANSWAYLHKSIQDNKISFPLAKDGLLELILRNRVREWLLERIIEGSKKSTEFDAYGQGVIHLCAILGYSWAIQLFAWSGLTLDFRDKSGWTALHWAAYCGREKMVAVLLYAGAKPNLVTDPTSENPGGCTAADLAYVKGHDGLAAYLSEKALVAHFQEMSIAGNISGTLQINATDMESVNSENLSEEQLYMKDTLAAYRTAADAAARINAAFREHSYKQRTKEVQVSTPEMEARNIIAAMKIQHAFRNYEMRRKMAAAARIQHRFRTWKMRKDFLNMRRQAIRIQAAFRGFQERRHYRKIIWSVGVLEKAILRWRLKRKGFRGLQVEPLEPIAEVREESDTEEDFYRTSQKQASERVERSVVQVQALFRSRKAQEDYKKMKMAHLEAMVRNTP 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8924832 8942673 + Bpe015783.1 Bpe04g01108 102917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01108 906 Pfam IQ calmodulin-binding motif 792 811 IPR000048 GO:0005515
Bpe04g01108 906 Gene3D - 534 671 IPR036770 -
Bpe04g01108 906 ProSiteProfiles CG-1 DNA-binding domain profile. 9 145 IPR005559 GO:0003677
Bpe04g01108 906 SMART CG_1_2 12 140 IPR005559 GO:0003677
Bpe04g01108 906 ProSiteProfiles IQ motif profile. 871 899 IPR000048 GO:0005515
Bpe04g01108 906 ProSiteProfiles IQ motif profile. 790 814 IPR000048 GO:0005515
Bpe04g01108 906 ProSiteProfiles Ankyrin repeat profile. 601 633 IPR002110 GO:0005515
Bpe04g01108 906 Gene3D - 766 814 - -
Bpe04g01108 906 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 4 902 - -
Bpe04g01108 906 SMART ANK_2a 601 630 IPR002110 GO:0005515
Bpe04g01108 906 SMART ANK_2a 640 669 IPR002110 GO:0005515
Bpe04g01108 906 Pfam IPT/TIG domain 364 450 IPR002909 -
Bpe04g01108 906 Pfam CG-1 domain 15 138 IPR005559 GO:0003677
Bpe04g01108 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 760 897 IPR027417 -
Bpe04g01108 906 SUPERFAMILY Ankyrin repeat 560 663 IPR036770 -
Bpe04g01108 906 SMART iq_5 789 811 IPR000048 GO:0005515
Bpe04g01108 906 SMART iq_5 766 788 IPR000048 GO:0005515
Bpe04g01108 906 SMART iq_5 869 891 IPR000048 GO:0005515
Bpe04g01108 906 ProSiteProfiles IQ motif profile. 767 793 IPR000048 GO:0005515
Bpe04g01108 906 Pfam Ankyrin repeats (3 copies) 550 630 IPR002110 GO:0005515
Bpe04g01108 906 Gene3D Immunoglobulins 358 454 IPR013783 -
Bpe04g01108 906 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 4 902 - -
Bpe04g01108 906 ProSiteProfiles IQ motif profile. 751 777 IPR000048 GO:0005515
Bpe04g01108 906 SUPERFAMILY E set domains 364 451 IPR014756 -
Bpe04g01108 906 ProSiteProfiles Ankyrin repeat region circular profile. 601 629 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01108 Bpe05g00817 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01108 Bpe-Chr4:8924832 Bpe05g00947 Bpe-Chr5:22392835 1.25E-29 dispersed
Bpe04g01108 Bpe-Chr4:8924832 Bpe05g00817 Bpe-Chr5:21459888 5.54E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21312 PF03859 CG-1 7.40E-40 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01108 K21596 - fve:101314356 1179.85