Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe04g01121 | ATGGCATCATCTCTGATTTCGAATCCAGTGATTAACTCTGATCGTTCTCGAGCATCTTCAAGAAGGAAAAAGAAGAAGAGAACTCAACCGAATAGAGACCACAATCAAGATCAGAGCCCTATCAAATGGAAATCTGAAGCGCAGCAGCAAATCTACTCGTCCAAGCTTGTTCAAGTGCTGAGGCAAGTGAGACTCAGCCATGACGCTTCGTCTCCAAACGAAGTTCCTCGCCGCGGCCGCGCTGTTCGCGAAGCCGCCGATAGAGTCTTAGCCGTCTCCGCAAGGGGTAAAACTCTATGGAGCCGAGCGATCTTGACGAAACGCTTGAAGCTCAAATTCTCCCAGCGGAAAAGGCACAGAGTCTCCTACGCTGCGAACAACCACTCAAAGAAGCCTCGAGCGAGCGTTTTGCGATTGAAAGGCAAGTCTCTACCAGCGGTTCAGAGAAAGGTTCGGCTACTCGGACACTTGGTTCCTGGGTGCCGGAAGCAATCGTTTCCGGTGATTCTAAAAGAGGCTACTGATTATATAGCCGCTCTTGAGATGCAGGTCCGTACACTCGCTCAGTTGCTCTCTGCTTCTGATTCTGGTTCTTCCTCGTTACCGCCGAGCTGA | 615 | 50.73 | MASSLISNPVINSDRSRASSRRKKKKRTQPNRDHNQDQSPIKWKSEAQQQIYSSKLVQVLRQVRLSHDASSPNEVPRRGRAVREAADRVLAVSARGKTLWSRAILTKRLKLKFSQRKRHRVSYAANNHSKKPRASVLRLKGKSLPAVQRKVRLLGHLVPGCRKQSFPVILKEATDYIAALEMQVRTLAQLLSASDSGSSSLPPS | 204 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 9505572 | 9506186 | + | Bpe015801.1 | Bpe04g01121 | 102930 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe04g01121 | 204 | CDD | bHLH_AtIBH1_like | 136 | 187 | IPR044549 | GO:0006355 | |
| Bpe04g01121 | 204 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 151 | 192 | IPR036638 | GO:0046983 | |
| Bpe04g01121 | 204 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Bpe04g01121 | 204 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 203 | IPR044660 | GO:0006355 | |
| Bpe04g01121 | 204 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Bpe04g01121 | 204 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 203 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe13g00704 | Bpe-Chr13:13634813 | Bpe04g01121 | Bpe-Chr4:9505572 | 1.83E-69 | wgd | |
| Bpe14g01094 | Bpe-Chr14:8166699 | Bpe04g01121 | Bpe-Chr4:9505572 | 4.73E-69 | wgd | |
| Bpe04g01121 | Bpe-Chr4:9505572 | Bpe05g00801 | Bpe-Chr5:21350249 | 7.36E-85 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe04g01121 | - | - | csin:114308377 | 232.646 |