Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01122 ATGGCGAAAAAGGAAGAAATAGATCAGGATGGCAACTATTCTCTACCCAATTCCTCCTCCATCATATTAACCGACGAGATGTCATCATGTTTTTGTTTATCAGCAATCGCCAGTGAGGAAGAAAAAGAGTATTTAGGGTTTACAGACTGGTTGGATATCCAGGATTACAACCCTTTTTCACTCGACGTTTCGCTGCCTATGAAGATTACACCACCACCGCTAACTCTGTCGTCGCCGGCTTGGACGGCTCCTGTGTCATCAGAGGTGTGGAATGCACCGGCGACTCCGTCAGTGTCGGTTTCTTCTGAAGTAGGAAATTATGGCCGACCTCAGCACCATGACAGTGAAGCAGCTCTAGATGAAGGAAAGACTAAAGAGACGTTGAAACCCAAAAAGAAGAATCAGAAGAAGGAAAAGGAGGCAAGAGTTGCATTCATGACAAAGAGTGAGGTGGATCACCTTGATGATGGCTACAGATGGCGAAAGTATGGCCAAAAAGCTGTGAAAAATAGCCCCTATCCAAGAAGCTATTATCGGTGCACCGCCCCGGGATGTCGAGTGAAGAAGAGAGTCGAGCGGCTTTCCAATGACCCTTCCACCATCGTCACCACCTATGAAGGTCAACACAACCATCCAACCCCGTTAACGCCTCGTGGAATCATCGAAATTTTGCCGGAATCTACCCCCTTTCCCTCGACTAATTGGTCAACACCATTTTCACTATCCCAATATCTACTCCACCGAAAGAATCGAGGAGGAGGAGGAATGTGTAATAGCTCATCCTCTTCTCTGAACATTGCAGCAAACCCTTCCCCCATCAGTCCTATTCCTACAATGTCTGGTTTTGCTCGCCAACAAAGACAACAATTTGGACCATCTTTGGCTTCTAATTTGCTCACAGACCATGGCCTTCTTCAGGATGTAGTGCCATGGCAGATGCGAGGGGAGTTGATGAAAGATGAGAAAAATTAA 972 46.5 MAKKEEIDQDGNYSLPNSSSIILTDEMSSCFCLSAIASEEEKEYLGFTDWLDIQDYNPFSLDVSLPMKITPPPLTLSSPAWTAPVSSEVWNAPATPSVSVSSEVGNYGRPQHHDSEAALDEGKTKETLKPKKKNQKKEKEARVAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTAPGCRVKKRVERLSNDPSTIVTTYEGQHNHPTPLTPRGIIEILPESTPFPSTNWSTPFSLSQYLLHRKNRGGGGMCNSSSSSLNIAANPSPISPIPTMSGFARQQRQQFGPSLASNLLTDHGLLQDVVPWQMRGELMKDEKN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9543590 9544988 + Bpe015802.1 Bpe04g01122 102931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01122 323 MobiDBLite consensus disorder prediction 105 140 - -
Bpe04g01122 323 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01122 323 Gene3D WRKY domain 138 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g01122 323 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 78 311 - -
Bpe04g01122 323 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01122 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 311 IPR044810 GO:0003700
Bpe04g01122 323 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g01122 323 MobiDBLite consensus disorder prediction 109 140 - -
Bpe04g01122 323 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01122 Bpe13g00706 CCT
Bpe04g01122 Bpe13g00706 ECH
Bpe04g01122 Bpe14g01092 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01122 Bpe-Chr4:9543590 Bpe12g00287 Bpe-Chr12:3371482 4.87E-43 dispersed
Bpe13g00817 Bpe-Chr13:14475450 Bpe04g01122 Bpe-Chr4:9543590 7.94E-34 transposed
Bpe13g00706 Bpe-Chr13:13646723 Bpe04g01122 Bpe-Chr4:9543590 1.44E-71 wgd
Bpe14g01092 Bpe-Chr14:8150578 Bpe04g01122 Bpe-Chr4:9543590 2.09E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21314 PF03106 WRKY 9.80E-27 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01122 - - hbr:110669417 240.35