Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01164 ATGCCCGCTAACGCCATTGTTAAGCCTCCAGTTTTTCCTCAATCACTGTCTACGTCATCTACTTTCAACCCTCCTGGACTTCCTCTCGCACTTCGTTCTAATTTGGAGGGGAGACGAGAGGCGTTCCCCAAAATGGCTGAAGCTTTCGAACCTAACCTTGGGAGAAGAAGTAGAGAGGAACTAGAGTACGAGAGCATATCCGGCAGTGAAAACATTGACGACGGCTCCGGCGACGACAAAGATGCTACCAACGGTAACCCACCCAGAATGAAACGACACCACCGACATACTCCCCAGCAAATCCAAGAGCTCGAATTAGTTTTCAAGGAGTGCCCTCATCCTGACGAGAAGCAAAGACTAGAGCTAGGCAGTATGCTTGGTTTAGAAACCAGACAAGTTAAATTCTGGTTCCAAAATCGTCGAACCCAAATGAAAACTCAGTTGGAAAGGCATGAGCATGCATTGCTCCGGCAAGAGAATGACAAGCTTAGATCGGAGAACTTGTCGATTAGAGATGCCATGAGGATCCCAATTTGCTCCAACTGTGGTGGCCCTGCAATGATTGGCGAAATTTCACTCGAAGAACAGCAACTTAGGATTCAAAATGCCCAACTGAAAGACGAGATACACCGTGCTTTCTTCCTCGCAGGAAGGTTTCTGGGTCGACCGATTTCGAAACTCGGTACCTCCGTTGCAACTTCATTTTCAGGCTCAAATTTAGAGGTTGACGGGCTCACTCCGCCTGCGTCCGTGCCTCTCGAGCCTGAATCCGTCGTCGGACATTTGCATAGGCCGGTAGCGAGGTCGATATTTCTAGAGCTGGGTTTGGCTGCGATGGATGAACTGGTGAAAATGGCACAGACGGACGAGCCTCTCTGGACCGGAAATTCAGACACGGGAAGAGAAATTCTAAACCAGGCGGAGTATATCAGAATGTTTAATCCTTATATTGGCTTTAAACCAAATGGTTTCGCGAGCGAGGCATCGAGACAGAGCAGCGTTGTGATCATCAACAGCGTAGCTCTTGTCGAAATTCTGATGGATTCGAATCGGTGGGCCGAGGTGTTTCCTGGTTTGATTGTCAGAGCCACCACAACCGACGTGATTTCGAGCGGAGTGGGAGGAACTAGACATTGCGCATTACAACTGATGGAGGCTGAGTTTGCAGTTCTGTCCCCGTTGGTTCCGGTTCGGGCAGTGAGCTTCCTCCGCTTCTGCAAACAGCATGGCGATGGGCTTTGGGCAGTGGTCGACGTCTCCATTGAGTCAAAGAAAGAAGCTCACCCCAAATTCAGGAGGCTTCCTTCTGGCTGTGTTGTTCAGGATATGCCAAATGGGTTTTCTAAGGTTACTTGGGTGGAGCATGCAGAGTACGACGAAAGCCAAATCCACCACCTCTACCGCCCACTAGTAAGCTCCGGCATGGGGTTTGGTGCTCCCCGATGGCTTGCCGCCCTCCAACGCCAATGCCAATCTCTAGCCATCCTCTTATCTCCCTCCCTTCACCCTCCTGGTCTCGCTGCAATAACTCCGGCGGGTCGTCGGACCATACTGAAGCTGGCCAATAGGATGACGGAAAACTTCTGCGCCGGAGTGTGTGCATCGACGGTGCACAAATGGAACAAGCTCCATGCCGGGAATGTTGACGAGAACATACGAGTAGTGACCCGAAAAAGTGTCAATGATTCCGGCGACCCACCGAGCATTTTATTGGGCGCAGCCACGTCTGTTTGGGTGCCTGTTTCCCCACAAAGGCTGTTTGCCTTTCTTCGTGATCATCGGCAGAGAAGCGAGTGGGACGTTCTATCGAACGCCGGATCCATGCAGGAGATGACTCACATTGCCAAAGGCCATGATCTAGGCAACTGCGTCTCTCTCCTCCGAGCAAACCCTGTGAATGCGAACCAGAGCAGTATGCTGATACTGCAGGAAACATGCACAGACGCTGCCGGATCGCTTGTCATGTACGCCCCACTCGACATTCCGGCTATGCACGTCGTGATGAACGGTGGAGATTCATCCTCTGTGACACTACCGCCATCAGGATTTGCGATTGTGCCAGATGGACGACGGTGGGCTGGTCAAACAGAAGGAATCAACGGTAATGAAAGTGGGTCCCTCCTCACAGTAGCCTTCCAGATCCTTGTGAACAGCCTTCCTACGGGCAACCTCACCGTAGAGTCGGTGGAAACAGTCAACAATCTCATCTCTTCAACCATCCGTAAGATCAAGGCCGCCCTAGCCCCCGTGACATAA 2256 51.51 MPANAIVKPPVFPQSLSTSSTFNPPGLPLALRSNLEGRREAFPKMAEAFEPNLGRRSREELEYESISGSENIDDGSGDDKDATNGNPPRMKRHHRHTPQQIQELELVFKECPHPDEKQRLELGSMLGLETRQVKFWFQNRRTQMKTQLERHEHALLRQENDKLRSENLSIRDAMRIPICSNCGGPAMIGEISLEEQQLRIQNAQLKDEIHRAFFLAGRFLGRPISKLGTSVATSFSGSNLEVDGLTPPASVPLEPESVVGHLHRPVARSIFLELGLAAMDELVKMAQTDEPLWTGNSDTGREILNQAEYIRMFNPYIGFKPNGFASEASRQSSVVIINSVALVEILMDSNRWAEVFPGLIVRATTTDVISSGVGGTRHCALQLMEAEFAVLSPLVPVRAVSFLRFCKQHGDGLWAVVDVSIESKKEAHPKFRRLPSGCVVQDMPNGFSKVTWVEHAEYDESQIHHLYRPLVSSGMGFGAPRWLAALQRQCQSLAILLSPSLHPPGLAAITPAGRRTILKLANRMTENFCAGVCASTVHKWNKLHAGNVDENIRVVTRKSVNDSGDPPSILLGAATSVWVPVSPQRLFAFLRDHRQRSEWDVLSNAGSMQEMTHIAKGHDLGNCVSLLRANPVNANQSSMLILQETCTDAAGSLVMYAPLDIPAMHVVMNGGDSSSVTLPPSGFAIVPDGRRWAGQTEGINGNESGSLLTVAFQILVNSLPTGNLTVESVETVNNLISSTIRKIKAALAPVT 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12505762 12509555 + Bpe015855.2 Bpe04g01164 102973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01164 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 35 749 - -
Bpe04g01164 751 MobiDBLite consensus disorder prediction 56 99 - -
Bpe04g01164 751 MobiDBLite consensus disorder prediction 73 88 - -
Bpe04g01164 751 CDD homeodomain 91 147 IPR001356 GO:0003677
Bpe04g01164 751 SMART START_1 273 492 IPR002913 GO:0008289
Bpe04g01164 751 Pfam Homeodomain 92 145 IPR001356 GO:0003677
Bpe04g01164 751 SUPERFAMILY Bet v1-like 511 721 - -
Bpe04g01164 751 ProSiteProfiles START domain profile. 264 495 IPR002913 GO:0008289
Bpe04g01164 751 Pfam START domain 276 491 IPR002913 GO:0008289
Bpe04g01164 751 SUPERFAMILY Bet v1-like 266 493 - -
Bpe04g01164 751 Gene3D - 77 163 - -
Bpe04g01164 751 SUPERFAMILY Homeodomain-like 79 147 IPR009057 -
Bpe04g01164 751 SMART HOX_1 88 151 IPR001356 GO:0003677
Bpe04g01164 751 Coils Coil 188 208 - -
Bpe04g01164 751 MobiDBLite consensus disorder prediction 1 26 - -
Bpe04g01164 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 35 749 IPR042160 -
Bpe04g01164 751 MobiDBLite consensus disorder prediction 11 26 - -
Bpe04g01164 751 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Bpe04g01164 751 CDD START_ArGLABRA2_like 268 491 - -
Bpe04g01164 751 Coils Coil 141 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01164 Bpe-Chr4:12505762 Bpe14g00999 Bpe-Chr14:7375836 0 dispersed
Bpe04g01164 Bpe-Chr4:12505762 Bpe05g00780 Bpe-Chr5:21118981 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21316 PF01852 START 3.40E-48 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01164 K09338 - csv:101222248 1011.52