Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01179 ATGGGAGCTAAAAAATCTGATATTTTATTTGTTTTTGTTATTATTGGTTTGTGCGAAGGAAGTGGATTGAGGAGGAATTACTATAGCAAAAGTTGCTCTAATGCTGCGAGAATTATTAGGAATATAACATGGTTTAGGGTTCAAAGTAATCCTGCTTTGGCTGCAAGCCTTCTCAGACTCCATTTCCATGATTGCTTTCTAAGGGGATGCGATGGATCTGTTCTACTAGACTCTGTCGATGGAGGCAACCAATCCGAGAAGGAAGCTAAACAGAACCGATCTCTCCGAGGTTTTGAAGTGATTGATGAAATCAAAACCGAAATCGAAAATTCATGTCCTGGAGTTGTCTCCTGTGCAGATATCCTTTCTCTAGCTGCTCGAGACGCTATTGCTTTTCAATTTAAAAGATCGTTATGGGAGGTGGAGAGTGGAAGAAGAGACGGAAGGGTTTCGGACGTCAATGAAGTGAGTGGGAACATACCTTCTCCATTTTCGAATTTCTCCACTCTTAAGCAACTTTTTGATGATAAAGGTCTTGGTGTTAAAGACCTGGTCGCGTTATCAGGCGCGCATACAATTGGAGTAGCCCACTGCGGAGCATTCGCTCGGAGATTATACAACTTCACCGGCAATGCCGACGCCGATCCATCTCTCGACTCAGACTATTCCGACTTTCTCAGATCTCGCTGTCCCGATCCTCCCGACAATTCAACAACCGTCCAAATGGATCCCCACACTCCCCTCTCCTTCGATTCCAACTACTTCTCCCTTCTCTCCGACAACAGAGGGCTTTTCCAATCTGACGCCGTTCTTCTCTCCGACCGCGGCTCCGCCCATTTGGTCAGAATGTTCAGACGACCCAACACTTTCCTTTCCGCGTTCTCTGCATCGGTGAGAAAGTTGTCCACCGTCGACGTCCTTACTGGAACATCCGGTGAAATCAGAAAGAACTGTCGCCTTGTTAATTCTTAA 972 45.78 MGAKKSDILFVFVIIGLCEGSGLRRNYYSKSCSNAARIIRNITWFRVQSNPALAASLLRLHFHDCFLRGCDGSVLLDSVDGGNQSEKEAKQNRSLRGFEVIDEIKTEIENSCPGVVSCADILSLAARDAIAFQFKRSLWEVESGRRDGRVSDVNEVSGNIPSPFSNFSTLKQLFDDKGLGVKDLVALSGAHTIGVAHCGAFARRLYNFTGNADADPSLDSDYSDFLRSRCPDPPDNSTTVQMDPHTPLSFDSNYFSLLSDNRGLFQSDAVLLSDRGSAHLVRMFRRPNTFLSAFSASVRKLSTVDVLTGTSGEIRKNCRLVNS 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13438196 13439724 - Bpe015874.1 Bpe04g01179 102988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01179 323 Pfam Peroxidase 47 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 Gene3D Peroxidase, domain 2 161 301 - -
Bpe04g01179 323 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PANTHER PEROXIDASE 11 322 - -
Bpe04g01179 323 CDD secretory_peroxidase 22 321 IPR033905 GO:0004601|GO:0042744
Bpe04g01179 323 Gene3D - 26 322 - -
Bpe04g01179 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Bpe04g01179 323 PANTHER PEROXIDASE 25-RELATED 11 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Bpe04g01179 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe04g01179 323 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01179 Bpe-Chr4:13438196 Bpe15g00710 Bpe-Chr15:17643222 1.25E-82 dispersed
Bpe04g01179 Bpe-Chr4:13438196 Bpe12g00228 Bpe-Chr12:1908532 5.57E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01179 K00430 - egr:104414959 392.504