Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01185 ATGGATCAGTTTGATGAATCCTTTCAAAACAAAGCAGAGGCAGTATTGCGAGTTTTAGCTTTAAGAAGATGGGTTAAAGAGGATGATGTACCCTGCCAAATTGAAGAGGGCCTGTTCTTGGGTTCTGTTGCAGCGGCTTCTAACAAGAATGAACTGCAGAGGTTGAGAGTAACCCACATTTTAACCTTTTCATGTTCCCTACTGCCTTCGCATCCAACTGATTTTACTTATAAAGTGATCGAAGTAACGGACAAAGCGGACGAAAATATCACAAGGTACTTTGATGAGTGTTTCAATTTTATTGATGAAGCTAGACGGTTGGGTGGTGGCATACTTGTGCATTGCTTCGCCGGACGATCCAGAAGTGTGACTATTGTAGTTGCCTATTTGATGAAAAGCTGTGGTGTGAGTCTTTCTGAAGCACTAGAGCTTGTGAAGCTTAAACGGCCACTGGCAGCTCCTAATGTCGGTTTCATGTTACAATTGAAGGATTTTGAAAAATCTCTTCAAGGTTTGTATATTGAGACATAA 531 41.24 MDQFDESFQNKAEAVLRVLALRRWVKEDDVPCQIEEGLFLGSVAAASNKNELQRLRVTHILTFSCSLLPSHPTDFTYKVIEVTDKADENITRYFDECFNFIDEARRLGGGILVHCFAGRSRSVTIVVAYLMKSCGVSLSEALELVKLKRPLAAPNVGFMLQLKDFEKSLQGLYIET 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13571777 13573593 + Bpe015882.1 Bpe04g01185 102994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01185 176 CDD DSP 31 164 - -
Bpe04g01185 176 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 92 150 IPR000387 GO:0016311|GO:0016791
Bpe04g01185 176 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 171 IPR020422 GO:0006470|GO:0008138
Bpe04g01185 176 Gene3D Protein tyrosine phosphatase superfamily 32 174 IPR029021 -
Bpe04g01185 176 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B 16 170 - -
Bpe04g01185 176 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 30 170 IPR029021 -
Bpe04g01185 176 Pfam Dual specificity phosphatase, catalytic domain 38 167 IPR000340 GO:0008138|GO:0016311
Bpe04g01185 176 SMART dsp_5 30 168 IPR020422 GO:0006470|GO:0008138
Bpe04g01185 176 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 16 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01185 Bpe-Chr4:13571777 Bpe12g00460 Bpe-Chr12:10343710 2.24E-26 dispersed
Bpe04g01185 Bpe-Chr4:13571777 Bpe04g01698 Bpe-Chr4:22896576 1.71E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01185 - - vvi:100264956 238.424