Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01195 ATGAAGAAAGTGATCCCTGGAAACGGAAAAATCTCGAAAGATGCAAAGGAAACTGTTCAAGAATGTGTTTCGGAGTTCATTAGCTTTGTCACTGGCGAGGCTTCCCAGAAATGTCAAAGAGAAAAACGAAAGACCATTAATGGAGATGATATTCTATGGGCTATCACCACCCTAGGGTTTGGAGATTATGTGGAACCACTTAAATCTTATCTTGACAAGTACAGAGAAATCGAATGTGAAAAGCTTAATGTTCCAAAACAACACAGAGCTGAGCAAAGGTTGTTGCATGGTCAACAACAAGAACAAATCCTACCATACAAAGATTCATATTCTCCTGCCAATATAACCTCTCAACCCTCTTTTGGCTTGTCGAATCAGCCATTTTCGTTGCCGTTTTCCTTGCAGCAACAAGATCAGGTTGATTCAGTGGGTCATTGGTAG 441 40.59 MKKVIPGNGKISKDAKETVQECVSEFISFVTGEASQKCQREKRKTINGDDILWAITTLGFGDYVEPLKSYLDKYREIECEKLNVPKQHRAEQRLLHGQQQEQILPYKDSYSPANITSQPSFGLSNQPFSLPFSLQQQDQVDSVGHW 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14481869 14482309 + Bpe015894.1 Bpe04g01195 103004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01195 146 Gene3D Histone, subunit A 1 108 IPR009072 GO:0046982
Bpe04g01195 146 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Bpe04g01195 146 PRINTS CCAAT-binding transcription factor subunit A signature 19 37 - -
Bpe04g01195 146 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Bpe04g01195 146 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Bpe04g01195 146 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 1 138 - -
Bpe04g01195 146 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 138 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe04g01195 146 SUPERFAMILY Histone-fold 1 89 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01195 Bpe-Chr4:14481869 Bpe14g00737 Bpe-Chr14:5698458 2.63E-46 dispersed
Bpe04g01195 Bpe-Chr4:14481869 Bpe07g00646 Bpe-Chr7:13218659 1.76E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21317 PF00808 CBFD_NFYB_HMF 6.60E-21 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01195 K08065 - cpap:110824736 220.705