Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01221 ATGATTTCTGTTGCGTCCTCCGTTGAAGCACAGCAGCCGGAGCTTTCTCTGACGGCGGTTAAACCACCGTCACCTAACATTCTTAGAAAGGTGGATTCCGAAACTACCGTCATCTTCAAATCGAAATTGCCGGATATTCCCATCCCCAATCACCTCCCTCTTCCCACCTACTGCTTTGAGCGCCTGTCCGAGTTCTCCGAACGGCCATGTCTGATAGTCGGATCCACCGGAAAAACCTACACTTTCGGAGAAACCCACCTCATTTCCAAAAGAGTTGGAGACGGATTGATCAGTCTCGGCATTAAAAAGAACGACGTCATAATGATACTCCTCCAAAATTCAGCTGAATTCATTTTCACTTTCATCGGCGCGGCCATGATCGGCGCGGTCACCACCACGGCCAACCCGTTCTACACCGGCGCAGAAGTTTTCAAGCAAATAAAATCCTCTGGAGCAAAACTGATCGTTACGCAGGCGCAATATGTTGAAAAACTCCGGGAGCCAACGGAAAATGACCCCAAACTCGGCGAGGATTTCACAGTAATCACCACTGACAACCCACCGGAGAAATGCCTACACTTCTCAGCAATTTTGGAGACAAACGAGGCCGGTCTCCCAGCCACTGCAATCGACGCAAACGACCCAGTGGCGCTGCCGTTTTCCTCCGGCACCACCGGGCTACCTAAGGGAGTAATTCTCACCCACAAAAGCCTAATAACAAGCGTAGCTCAGCAAGTAGACGGAGAGAACCCAAATCTCTATCTAACACCAGACGACGTCGTTTTATGCGTCCTCCCACTATTTCACATATACTCTCTCAATAGCGTCCTTTTATGCTCCTTGAGAGCAGGAGCAGCCGTTTTGCTCATGCAAAAGTTTGAGATAGGGGCATTTTTGGAATTAATCGTTCGCCACAAGGTGTCGGTTGCTGCGGTGGTGCCGCCGCTCGTATTGGCTCTTGCCAAAAACCCTAAGGTGGCAGAATTCGACCTCAGCTCCATTCGGATAGTGTTGTCAGGGGCGGCTCCGCTAGGGAAGGAGCTGGAGGAGGCCCTCAAGAGCCGACTGCCCCAAGCCACTCTTGGACAGGGGTATGGGATGACAGAAGCCGGGCCGGTGCTGTCAATGTGCTTGGGGTTTGCACGTCAGCCATTTGCGACAAAGTCCGGGTCGTGTGGGACAGTGGTCAGAAATGCAGAGCTGAAAGTAATCGACCCTAACACCGGAGCATCCCTTGGCTACAACCAGCCCGGAGAGATCTGCATCCGTGGTGCCCAAATCATGAAAGGATATTTAAATGACGATGAGGCCACAACAAACACTATTGATGGGGACGGATGGCTTCACACTGGCGACATTGGCTACGTCGACGACGACGAAGAAGTTTTCATTGTAGATAGAGTGAAAGAGCTCATTAAATTCAAAGGATTCCAGGTGCCACCGGCTGAGCTCGAGTCTCTTCTTGTGAGCCATCCATCAATCGCAGATGCCGCAGTCGTGCCGCAAAAAGATGTAGTTGCTGGGGAAGTTCCTGTTGCATTTGTTGTTCGTTCAAATGGGTTGGATCTCACCGAAGAAGATGTCAAAGAATTTATTGCCAAACAGGTGGTGTTCTATAAGAAACTGCACAGAGTATACTTTGTGAGTGCAATTCCAAAGTCTCCGGCAGGCAAGATTTTGAGAAAAGATTTAAGAGCAAAGCTTGCATCGCCATACCCTCTCTTCTCTTAA 1731 50.09 MISVASSVEAQQPELSLTAVKPPSPNILRKVDSETTVIFKSKLPDIPIPNHLPLPTYCFERLSEFSERPCLIVGSTGKTYTFGETHLISKRVGDGLISLGIKKNDVIMILLQNSAEFIFTFIGAAMIGAVTTTANPFYTGAEVFKQIKSSGAKLIVTQAQYVEKLREPTENDPKLGEDFTVITTDNPPEKCLHFSAILETNEAGLPATAIDANDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLTPDDVVLCVLPLFHIYSLNSVLLCSLRAGAAVLLMQKFEIGAFLELIVRHKVSVAAVVPPLVLALAKNPKVAEFDLSSIRIVLSGAAPLGKELEEALKSRLPQATLGQGYGMTEAGPVLSMCLGFARQPFATKSGSCGTVVRNAELKVIDPNTGASLGYNQPGEICIRGAQIMKGYLNDDEATTNTIDGDGWLHTGDIGYVDDDEEVFIVDRVKELIKFKGFQVPPAELESLLVSHPSIADAAVVPQKDVVAGEVPVAFVVRSNGLDLTEEDVKEFIAKQVVFYKKLHRVYFVSAIPKSPAGKILRKDLRAKLASPYPLFS 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17441406 17444198 + Bpe015930.1 Bpe04g01221 103030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01221 576 CDD 4CL 48 564 - -
Bpe04g01221 576 SUPERFAMILY Acetyl-CoA synthetase-like 46 570 - -
Bpe04g01221 576 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Bpe04g01221 576 Gene3D - 29 468 IPR042099 -
Bpe04g01221 576 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 567 - -
Bpe04g01221 576 Pfam AMP-binding enzyme 61 474 IPR000873 -
Bpe04g01221 576 Gene3D - 469 570 IPR045851 -
Bpe04g01221 576 PANTHER 4-COUMARATE--COA LIGASE 3 36 567 - -
Bpe04g01221 576 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00412 Bpe-Chr3:21054353 Bpe04g01221 Bpe-Chr4:17441406 0 dispersed
Bpe04g01221 Bpe-Chr4:17441406 Bpe09g00463 Bpe-Chr9:12619951 0 dispersed
Bpe08g01228 Bpe-Chr8:13858520 Bpe04g01221 Bpe-Chr4:17441406 3.99E-16 dispersed
Bpe04g01221 Bpe-Chr4:17441406 Bpe02g02090 Bpe-Chr2:22385872 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01221 K01904 - jre:108988342 886.33