Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01284 GTCTTTTCGACAAGTTCTGAAAAATCTGCTTTCAAAGGCGAAGAAGACCGAGGAAAGCTTACGATGGTGCTACTAGTAGGTGCCCCAGGAAGCGGCAAATCCACCTTCTGCGAAAACCTCATATCATCTTCTACCTCCTCTTGGTTTCGAATCTGCCAGGATACTATTGCAAATGGTAAATCTGGGACTAGAGCTCAGTGTCTAAAGATTGCAGCCAGTGCGTTAAAAGATGGTAAAAATGTACTAATAGACCGATGCAATATGGAAAAAGAACAACGGGCAGATTTCGTTAAGCTTGGTAGTTCCCAAGTGGTTGTTCATGCTGTCGTCCTAGATCTTCCTGCACAACTTTGCATTTCTCGATCTGTTAAGCGAACCGATCATGAAGGAAACCTACAAGGTGGCAAAGCTGCTGCCGTAGTAAATAAAATGCTGCAGAAGAAAGAATTGCCTAAACTCAGTGAAGGGTTTACTCGTATCACTTACTGTCAGAATGAGAGTGATGTTCAATCCACACTCAATACATATAGTTCACTCGGTCCTTTGAGTACCCTTCCGAATGGATATTTTGGCCAAAAAAATCGAAGTGCAAAAGTGCAACTTGGCATAATGAAATTCCTCAAGAAAGCTGACGATCATACTCCTACAAGATACGAAGCACCAAACATTCAGAGTACATCTCCTCAAGCTACAGAAATTAAGAGTACCTGCAGTGAAATTATAGCTTCAGTTTCTTTTCACTCCAATAAAGAGTTAAAGGAAGGAGAGGATCCTATGGTCGAGTCTGTCGAAGGCGAGAGATTTTCAAATAATGCTCAAACTCTTGCATTCCCATCTATTTCAACGGCAGATTTCCAATTCAGTCTTGAAAAGGCATCTGAGATTATTGTTGAGAAAGTTGAAGAATTTATGGACAAGCTTGGGAATTCTAGGCTTGTTTTAGTAGACTTGAGCCATAGATCAAAGATTTTGTCTTTGGTTAAGGGGAAAGCTGATCAGAGAAACATTGACTCAAGTAAGTTTTCAACATTTGTGGGAGATATAACTCAACTTTATTCAAAAGGTGGCTTGCGCTGCAATGTCATTGCTAATGCTGCAAACTGGAGGCTAAAACCTGGAGGTGGAGGTGTGAATGCTGCCATTTTCAAAGCTGCTGGTACTGCACTGGAAGTGGCAACCAAAGAGCTGGCAAAGTCTCTTCAACCTGGTAATGCAGTTGTAGTTCCTCTACCTTCAGCTTCTAAATTGTTCAAAGAGGAAGGTGTGACTCATGTCATACATGTTCTTGGACCAAATATGAATTCTCAAAGGCCGAATTGCCTCAATAATGATTATAACAAAGGTTCTGAACTTCTCCGGGCGGCTTACACTTCTCTATTTGAAGGCTTTCTCTCTTTAGTGAGAAACCAATCAAATTTAGCTAAAGATTGTAGTGATCACTTTGAGTCGAGGCCTTTAGAGTCCCCAAAAGAAGCTCAGGGTGTGGCTAGGAATCCATTTTATGGTGGTGACCAAAAGATGAAGAGAGAAAGCGATCTAGAATTTGAAAAGAGCAAAAAATGCAAAGGATATCAGCTGGAAGATGATACTGACCTTGGAAGTGTGAATACAAAGAGTAAGAAAATTGGTGAAAACACAAGCAAGGCATGGGGATCTTGGGCTCAATCGCTGTACAAAATTGCTATGGAGCCTGAGACTCATAAGGATAAAGTTTTGGAGATATCAGATGATGTTGTTGTCCTAAATGATCTTTATCCGAAGGCACAGAGACATGTCCTAGTTTTGGCTCGTGACGAAGGCCTTGAAAGCTTGGTCAATGTCAGGGCTGATCACCTTCAGTTGTTGAGGAAAATGCATGCAGTGGGCTTGAAATGGGCAGAGAAATTCATTCATGAAGATGCTTCGTTAGTCTTTCGCCTTGGATATCACCCAGCCCCGTCAATGCGACAACTTCATCTCCATGCGATTAGCCAGGATTTCAATTCGAAACACTTGAAGAATAAGAAACATTGGAATTCTTTTAACACTGCTTTCTTTAGAGATTCTGTCGATGTAATTGAGGACGTCGATATTCACGGTAAAGCAACAGTGAAGGATAACGAATCTCTGATATCTATGGAGTTACGATGCAACCGATGTAGAAGCGCTCACCCCAACATTCCCAAATTGAAATTACATATCAGCCACTGTCGAGCTCCCTTTCCTTCCCATCTTCTTCAAAATAGTCGTCTTGTGCAGGCACCAACTATTGATAATGATGCT 2262 41.47 VFSTSSEKSAFKGEEDRGKLTMVLLVGAPGSGKSTFCENLISSSTSSWFRICQDTIANGKSGTRAQCLKIAASALKDGKNVLIDRCNMEKEQRADFVKLGSSQVVVHAVVLDLPAQLCISRSVKRTDHEGNLQGGKAAAVVNKMLQKKELPKLSEGFTRITYCQNESDVQSTLNTYSSLGPLSTLPNGYFGQKNRSAKVQLGIMKFLKKADDHTPTRYEAPNIQSTSPQATEIKSTCSEIIASVSFHSNKELKEGEDPMVESVEGERFSNNAQTLAFPSISTADFQFSLEKASEIIVEKVEEFMDKLGNSRLVLVDLSHRSKILSLVKGKADQRNIDSSKFSTFVGDITQLYSKGGLRCNVIANAANWRLKPGGGGVNAAIFKAAGTALEVATKELAKSLQPGNAVVVPLPSASKLFKEEGVTHVIHVLGPNMNSQRPNCLNNDYNKGSELLRAAYTSLFEGFLSLVRNQSNLAKDCSDHFESRPLESPKEAQGVARNPFYGGDQKMKRESDLEFEKSKKCKGYQLEDDTDLGSVNTKSKKIGENTSKAWGSWAQSLYKIAMEPETHKDKVLEISDDVVVLNDLYPKAQRHVLVLARDEGLESLVNVRADHLQLLRKMHAVGLKWAEKFIHEDASLVFRLGYHPAPSMRQLHLHAISQDFNSKHLKNKKHWNSFNTAFFRDSVDVIEDVDIHGKATVKDNESLISMELRCNRCRSAHPNIPKLKLHISHCRAPFPSHLLQNSRLVQAPTIDNDA 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18960355 18963440 - Bpe025689 Bpe04g01284 103093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01284 754 SUPERFAMILY HIT-like 541 714 IPR036265 -
Bpe04g01284 754 Pfam C2HE / C2H2 / C2HC zinc-binding finger 675 728 IPR032566 -
Bpe04g01284 754 Gene3D - 552 733 IPR036265 -
Bpe04g01284 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 132 IPR027417 -
Bpe04g01284 754 MobiDBLite consensus disorder prediction 480 503 - -
Bpe04g01284 754 Pfam Scavenger mRNA decapping enzyme C-term binding 559 670 - -
Bpe04g01284 754 Pfam Macro domain 363 459 IPR002589 -
Bpe04g01284 754 ProSiteProfiles Macro domain profile. 328 546 IPR002589 -
Bpe04g01284 754 Gene3D - 4 178 IPR027417 -
Bpe04g01284 754 Gene3D Leucine Aminopeptidase, subunit E, domain 1 220 320 IPR043472 -
Bpe04g01284 754 SUPERFAMILY Macro domain-like 268 314 IPR043472 -
Bpe04g01284 754 SMART YBR022w_8 340 618 IPR002589 -
Bpe04g01284 754 Pfam AAA domain 22 131 - -
Bpe04g01284 754 Gene3D Leucine Aminopeptidase, subunit E, domain 1 321 462 IPR043472 -
Bpe04g01284 754 PANTHER APRATAXIN 21 749 IPR026963 GO:0003677|GO:0006281|GO:0033699
Bpe04g01284 754 PANTHER APRATAXIN-RELATED 21 749 - -
Bpe04g01284 754 SUPERFAMILY Macro domain-like 328 461 IPR043472 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01284 K10863 - qsu:112040136 1008.05