Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01290 ATGATCAACGGAACATTTCCAGACAGCTTGTTTAACCTCTCCTTTCTTGTTTCGTTGAATCTCGAAGGCAATAACTTTGACGGAAAAATTCCTGATTCGTTCGTTAGATTACAGAATCTCTCGATTATCAACCTCAAAAACAATCAGCTCCATGGGGAGATCCCTGTGGATATTGGAAATTTATCCTTAATCAGTCAGCTGGACTTCTCCGAAAATAACTTCACCGGAGGAATTCCGGCATCGATCAGCAGTCTGGCCAATCTTACTTCTTTTAATGTCTCCTACAATAATCTCTCCGGCCCTGTTCCACTGTCCCTCTCGAAGAAATTCAATTCCAGCTCTTTTGCGGGGAATCTTCAGCTATGTGGGTATAGCCCTTCGCTCCCATGTCCTTCTCCATTGCCGTTAAATATTCCAGCTCCAGCGCTAGAAACATCAACAAAGCATCGCCGGAAACTGAGTACAAAGGACATAATTCTGATAGCAGTTGGGGCGCTTCTGGTGTTCTTACTCCTATTTTGCTGCATATTGGTCGGCTGTTTGGCGGGCAAGAAAGATAATGGTAAAATCTCCAAACAGGATACTTTAAGGAGCAGTGAGAAAGCAATTCCGGCCGGCACTGAAATCGGAACCGGCCAGGCAGGTGGAAAGCTAGTCCATTTCGACGGGCCATTCGTGTTTACAGCAGATGATCTCCTGTGTGCAACTGCAGAGATAATCGGTAAAAGCGCGTACGGGACAGCTTACAAAGCGACATTGGAAGATGAAAATGTAGTTGCAGTGAAGAGACTGAGGGAGAAGGCAACGAAAGTGCAGAAGGAATTCGAGCATGAAGTTGCAGAAATTGGGAAGATTCGCCATCCAAATCTTCTATCCCTTAGAGCTTACTACTTGGGTCCTAAAGGAGAGAAGCTTCTTGTATTTGATTACATGCCCAATGGTAGTCTCGCTTCCTTCCTCCATGGTGAGATTTCCTCTTCCGCCATTTTTTTTTCATCCTTGAAACTGCTAGAAAGCTTAGTTTGCTCGTTGAATTTCGCAGCTCGAGGGCAGGAGAGCTTAATCGATTGGGCTACGAGGATGAAAATAGCAGTGGGAATCACTCGAGGACTCAGCTACCTCCACTCAGAAGAAATCAACATTATCCATGGAAATCTGACCTCAAGCAACGTCGTTCTGGACAAGAAATCAAACGCCAACATCGCGAATTTCGGCCTCGCGCGTCTCATGACCACCTCCACCGCAAACACCAACGAGATCGCTACAGCTGGAAGTCAAGGCTACAACGCCCCCGAGCTGTCTAAGACCAAAAAGACCACCTTAAAAACGGATATGTACAGCCTCGGAGTGATCATTCTGGAGCTCTTGACCGGAAAATCCCCCGGCGAACCACTGAATGGAATGGATTTACCTCAGTGGGTCGCTTCAATTGTGAAGGAGGAGTGGACGAATGAAGTTTTTGATTCGGAACTGATGAGGGACACACCCACAATTGGCGATGAATTGCTGAACACCTTGAAATTGGCTCTTCATTGCGTGGATCCTTCGCCGGCTGCCCGGCCAGACGTGCAGCAAGTTCTCGAGCAGTTGGAGGAGATTAAGCCAGTTCCTGCGGAAGAAGATGATACTCACATCCCTTCATCAAACCCATAA 1653 46.82 MINGTFPDSLFNLSFLVSLNLEGNNFDGKIPDSFVRLQNLSIINLKNNQLHGEIPVDIGNLSLISQLDFSENNFTGGIPASISSLANLTSFNVSYNNLSGPVPLSLSKKFNSSSFAGNLQLCGYSPSLPCPSPLPLNIPAPALETSTKHRRKLSTKDIILIAVGALLVFLLLFCCILVGCLAGKKDNGKISKQDTLRSSEKAIPAGTEIGTGQAGGKLVHFDGPFVFTADDLLCATAEIIGKSAYGTAYKATLEDENVVAVKRLREKATKVQKEFEHEVAEIGKIRHPNLLSLRAYYLGPKGEKLLVFDYMPNGSLASFLHGEISSSAIFFSSLKLLESLVCSLNFAARGQESLIDWATRMKIAVGITRGLSYLHSEEINIIHGNLTSSNVVLDKKSNANIANFGLARLMTTSTANTNEIATAGSQGYNAPELSKTKKTTLKTDMYSLGVIILELLTGKSPGEPLNGMDLPQWVASIVKEEWTNEVFDSELMRDTPTIGDELLNTLKLALHCVDPSPAARPDVQQVLEQLEEIKPVPAEEDDTHIPSSNP 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19168854 19170506 - Bpe016000.1 Bpe04g01290 103099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01290 550 Gene3D Phosphorylase Kinase; domain 1 225 310 - -
Bpe04g01290 550 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 348 539 - -
Bpe04g01290 550 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 329 - -
Bpe04g01290 550 SUPERFAMILY Protein kinase-like (PK-like) 237 536 IPR011009 -
Bpe04g01290 550 ProSiteProfiles Protein kinase domain profile. 234 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01290 550 Gene3D Ribonuclease Inhibitor 1 133 IPR032675 -
Bpe04g01290 550 Gene3D Transferase(Phosphotransferase) domain 1 311 545 - -
Bpe04g01290 550 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 348 539 - -
Bpe04g01290 550 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 329 - -
Bpe04g01290 550 Pfam Protein tyrosine and serine/threonine kinase 237 530 IPR001245 GO:0004672|GO:0006468
Bpe04g01290 550 SUPERFAMILY L domain-like 3 111 - -
Bpe04g01290 550 Coils Coil 261 281 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00915 Bpe04g01290 CCT
Bpe03g00985 Bpe04g01290 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01290 Bpe-Chr4:19168854 Bpe04g01792 Bpe-Chr4:23413628 1.60E-11 dispersed
Bpe14g00347 Bpe-Chr14:3324913 Bpe04g01290 Bpe-Chr4:19168854 1.38E-06 transposed
Bpe03g00985 Bpe-Chr3:29399732 Bpe04g01290 Bpe-Chr4:19168854 9.79E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63319 PF07714 PK_Tyr_Ser-Thr 1.10E-39 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01290 - - zju:107431044 670.618