Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01294 ATGAAGGACTTTTCTGAGTTTTCATTCCAACCGCAAGGACGTGATACAGCTTTATCTTCATCGTCTTCCTTCTTTCATGCTCCTTCAACAATGAGTAAAACAATGAATACGCAGCAAGAATCATGGAACTCCAGCGAACCAACGAAGCAAGTCAATTTCTTCTATGAGAAAATGGAAATAAAATCAGAAAATTTCCCAATCCAAACCTTCTCTTCAAACACAGTCCCACCTCCCCAGATGAACTTGCAGTCCAGTCAAAACCATCAAACCCAGAAATCGCAGTACATAAGGCCGCGACGAAATTCAGACGATGGATACAACTGGAAAAAATATGGACAAAAGCAGATGAAAGGAAGCGAAAACCCTCGCAGTTATTACAAATGCACACACCCGAACTGCCCGACGAAGAAGAAAGTAGAAAGATCTTCAGAGGGTCAGATCACCGAGATAGTTTATAAGGGAAGCCATAGCCATCCAAAGCCGGCTCAGTCCACCAGGCAATCATCTTCCCAGCTTTTTCAACCTTATTCCAGCACCAACTCTGGAGTTTTTCTGACAGAGGACTCTTCCGCCTCAGCCGGAGAGGAAGAATTCGAATCAAATTCTCCGATCAGTAGTTCCGATGAAATCGAGCCTGAGGCTAAAAGATGGCGAGGAGATCATGAAAATGATGGCGTTTCTGTGTCGTCTTCTTCTGGGAATAGGACTGTTAAAGAGCCAAGAGTTGTTGTTCAAACCAGGAGTGAAATTGATATTCTTGACGATGGGTATCGATGGAGGAAATATGGACAGAAAGTAGTAAAGGGAAACCCAAATCCAAGAAGTTATTACAAATGCACATCAACAAGCTGTCCGGTGAGAAAACACGTCGAGCGAGCAGCAACTGATGCCAGAGCAGTGATTACCACTTACGAGGGGAAGCACAACCACGAAGTTCCAGCAGCTCGCGGGGGCTATGCTCTCAATAGACCTTTGTCAAATCTTAATTCCACCACTATGGCAGCATCGATGCCTCTTAGGCCATCAGCTGTGTCCATCCATTCTAATCATCATCTTTCCTCCCTTAACAATACTGCGATCCAACCGCCAATTTCTCAATCAATGTTTGAAATATTGCCACCTGAAGACTTTGGATTGGGCGGGTATGGATCGACCATGATGTCTTACGAGACATTTTTGCCAGTCGCCAAGGAAGAACTCGAGGACCACGATAATTTTCTCAACTCACTCATGGATTAG 1239 44.47 MKDFSEFSFQPQGRDTALSSSSSFFHAPSTMSKTMNTQQESWNSSEPTKQVNFFYEKMEIKSENFPIQTFSSNTVPPPQMNLQSSQNHQTQKSQYIRPRRNSDDGYNWKKYGQKQMKGSENPRSYYKCTHPNCPTKKKVERSSEGQITEIVYKGSHSHPKPAQSTRQSSSQLFQPYSSTNSGVFLTEDSSASAGEEEFESNSPISSSDEIEPEAKRWRGDHENDGVSVSSSSGNRTVKEPRVVVQTRSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTSCPVRKHVERAATDARAVITTYEGKHNHEVPAARGGYALNRPLSNLNSTTMAASMPLRPSAVSIHSNHHLSSLNNTAIQPPISQSMFEILPPEDFGLGGYGSTMMSYETFLPVAKEELEDHDNFLNSLMD 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19204471 19206148 - Bpe016004.1 Bpe04g01294 103103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01294 412 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 369 IPR044810 GO:0003700
Bpe04g01294 412 MobiDBLite consensus disorder prediction 68 96 - -
Bpe04g01294 412 MobiDBLite consensus disorder prediction 1 47 - -
Bpe04g01294 412 SMART WRKY_cls 102 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 SMART WRKY_cls 253 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 MobiDBLite consensus disorder prediction 158 188 - -
Bpe04g01294 412 ProSiteProfiles WRKY domain profile. 103 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 SUPERFAMILY WRKY DNA-binding domain 100 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 SUPERFAMILY WRKY DNA-binding domain 245 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 Pfam WRKY DNA -binding domain 254 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 Pfam WRKY DNA -binding domain 103 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 3 369 - -
Bpe04g01294 412 MobiDBLite consensus disorder prediction 68 240 - -
Bpe04g01294 412 Gene3D WRKY domain 86 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 Gene3D WRKY domain 238 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 ProSiteProfiles WRKY domain profile. 248 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g01294 412 MobiDBLite consensus disorder prediction 224 240 - -
Bpe04g01294 412 MobiDBLite consensus disorder prediction 209 223 - -
Bpe04g01294 412 MobiDBLite consensus disorder prediction 9 47 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01294 Bpe-Chr4:19204471 Bpe08g00052 Bpe-Chr8:278046 2.52E-106 dispersed
Bpe04g01294 Bpe-Chr4:19204471 Bpe09g00135 Bpe-Chr9:910747 3.10E-79 transposed
Bpe04g01294 Bpe-Chr4:19204471 Bpe03g00733 Bpe-Chr3:27429969 5.99E-78 transposed
Bpe04g01294 Bpe-Chr4:19204471 Bpe11g00067 Bpe-Chr11:458552 3.34E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21323 PF03106 WRKY 3.80E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01294 K13424 - qsu:112035298 399.053