Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01302 ATGAAGACAGTTTACAGGGCATTTGATGAGGTGCTTGGAATGGAGGTGGCTTGGAATCAGGTTAAGCTCAAGGAGGCCTTCCACTCACCAGATTTATTGCAGAGGCTTTACTCTGAAGTACACCTCCTCAAAAACCTCAATCATTGCTCTATCATCCGCTTTCATACCCACTGGATCGATATCAATTCTAGATCCTTCAACTTCATCACCGAAATGTTCACCTCCGGCACCCTTAGAGAGTATAGACGGAAATATCAGCAAGTGGATATAAGGGCAGTGAAGAACTGGGCCCGTCAGATTCTATGCGGTTTGGCTTATCTGCATGAGCATGATCCTCCGGTGATCCATCGAGACCTCAAATGTGACAACATATTCGTCAATGGCCATCTCGGACAAGTCAAGATTGGTGATTTGGGTTTGGCTGCAATTCTTCAAGGATCCCAACGAGCTCACAGCACGCCAGAATTTATGGCCCCAGAGCTATACGAAGAGGAATACAATGAGCTTGTTGATATATACTCGTTTGGAATGTGTGTCCTAGAGATGCTGACTTCAGAGTACCCTTACAGCGAGTGCTCTAACCCTGCCCAAATCTACAAAAGGGTCACCTCGGGGAAGTTGCCCCAAGCATTCTACCAAATTCAAGATAAGGAACTGCAGCAATTTGTGGAGAGATGCATAGTGCCTGCTTCGAAGAGGTCAAGTGCAAGAGAGCTCTTGCTGGATCCTTTTCTATCCACCGAGAGCTTACTTCCCTGTGGAACAGTAATGGGGGCTCCTCCATTGAGAAGCAAGGACATGAACATCACTGGATCGATGAATTCAGAAGATGATACAATTTTTCTTAAAGTGCAAATTACTGATCAGGATGGTCAATCGAATAACATTTACTTTCCGTTTGACATCGTGAAAGATACTGCAATTGATGTGGCAAATGAGATGGTAAAAGAGCTGGAAATTTGTGGGTGGGAGCCAATGGAAATATCTAAGATGATAGAGGAGCAAATCACTTCTCTACTTCCTGGTTGGAAGCAGTTTGGTTCTCCACAATTTCATGATCAGGTCAGTTTCAATTATCAAGAAGAAGAAGAAGAAGATGTTAACATCACACCCTGCCTGTTATACTCAGATTCCTTGTACTCGTCCTCCTCGTCTTCTCTCCCACCTCTCAACTCCTCGCACGAAACCCAGGATTTGCATGGACGGGGGGCGATTTCTAGCCATGACTGCTGGCTTCAAGGAAATTTGTATATCGATGATGACGAAAAAAGTACAAACAGCTCTTTGAGTTCCTTCATGTACTCCAATATAAATTTCGGGTCTGACTATGAAGATAAATATGAATTCAATTCCAGAGGAGAAAACCCACTGTGGATATCAAAGATGGGTAGAAAAGACATGTACAGACAAGGGTCCCTGACGAAAATGAATTCCCAGAGAAATCATGGCAGGAACAGTAACATGCGAAATCCAAGTGAGGTTCGGTCTTTTGTGGACGTGCGTAGCCAGTTGTTGCACTGGTCTTTGGTAGAGAAAATAAGAGAGAGGCGGGAGTTCAAGACTGTTGGAGGCGTTGAGAATGTCGGTTTTCACCAGCCATGA 1602 44.44 MKTVYRAFDEVLGMEVAWNQVKLKEAFHSPDLLQRLYSEVHLLKNLNHCSIIRFHTHWIDINSRSFNFITEMFTSGTLREYRRKYQQVDIRAVKNWARQILCGLAYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQRAHSTPEFMAPELYEEEYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKRVTSGKLPQAFYQIQDKELQQFVERCIVPASKRSSARELLLDPFLSTESLLPCGTVMGAPPLRSKDMNITGSMNSEDDTIFLKVQITDQDGQSNNIYFPFDIVKDTAIDVANEMVKELEICGWEPMEISKMIEEQITSLLPGWKQFGSPQFHDQVSFNYQEEEEEDVNITPCLLYSDSLYSSSSSSLPPLNSSHETQDLHGRGAISSHDCWLQGNLYIDDDEKSTNSSLSSFMYSNINFGSDYEDKYEFNSRGENPLWISKMGRKDMYRQGSLTKMNSQRNHGRNSNMRNPSEVRSFVDVRSQLLHWSLVEKIRERREFKTVGGVENVGFHQP 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19366102 19368605 - Bpe016015.1 Bpe04g01302 103111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01302 533 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 533 - -
Bpe04g01302 533 Pfam Protein kinase domain 3 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01302 533 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 1 533 - -
Bpe04g01302 533 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01302 533 SUPERFAMILY Protein kinase-like (PK-like) 3 246 IPR011009 -
Bpe04g01302 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Bpe04g01302 533 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Bpe04g01302 533 SMART serkin_6 3 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01302 533 Gene3D - 264 345 - -
Bpe04g01302 533 Gene3D Transferase(Phosphotransferase) domain 1 73 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01302 Bpe-Chr4:19366102 Bpe08g00060 Bpe-Chr8:314245 0 dispersed
Bpe04g01302 Bpe-Chr4:19366102 Bpe06g00276 Bpe-Chr6:13710977 1.38E-128 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63320 PF00069 Pkinase 6.00E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01302 K08867 - qsu:112004065 642.884