Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01311 ATGGTTTCCTCACAATTTCCTGGTTTGACGGATTCCTGCAAGCCCAAGTTCATTCAGCATCAGTTTCTTTTTCCTCTCAATTCTGTTGATGCTGTGGCTGTTGACCACGTTGAGCTAGATTTCTCTGATATTTTTGGGCCTGTACCTTTTAATGAAGTTGATTCAGCTAATCTCGGCCTAGAAGGAGAAAGAAAGCTTGTTTTTGATGATCCAGAAGTCATTCGCAACAGGTCACATTCTTTGGTTGGTCCCTCTTCATACGTAAGTCAGTCATTTGGGCTCAGCGAGCTCACTATACATGAGAGTGAGGATTCAGGGGACCAAATTGAATTTATCAGTGAGGATGCTGTTGGAAAAATTCTGGAACCTTCAAATGATAATCGTATACTGGAGGGAGCTTTTGAAGGTGTGGTTATGAATTCCACAAAGGCACAGGGTGTTGGATTCGACGACTTTGAGATTTTAAAGGTTGTTGGCGCTGGTGCTTTTGCAAAAGTTTATCAGGTAAGGAAAAAGGGTACATCAGAGATCTATGCAATGAAAGTTATGCGGAAAGACAAGATCATGGAGAAAAATCACGCTGAATACATGAAAGCAGAGAGGGATATTTTGACAAAAGTTGAACACCCTTACATTGTCCAGCTTAGATACTCCTTTCAAACTAAATATAGACTGTATCTTGTTCTGGATTTCGTAAATGGGGGACACCTTTTCTTTCAGCTTTACCACCAAGGCCTTTTCAGGGAGGAGCTTGCTCGTGTCTATGCTGCTGAGATTGTTTCTGCTGTTTCTCACCTCCACGACAATGGCATAATGCACAGAGATCTGAAACCTGAAAATATTTTACTAGATATTGATGGCCATGCGATGCTGACTGATTTTGGCCTAGCAAAGCAATTTGACACCAATACAAGAAATAATTCTATGTGTGGAACGGTAGAATATATGTCACCTGAAATAGTTCTTGGAAAGGGCCATGATAAGGCTGCAGATTGGTGGAGCGTGGGAATTCTTCTGTTTGAGATGCTCACTGGGAAGCCTCCATTCACTGGGAATAGAGACAAAGTCCAGCAGAAGATAGTAAAGGATAAGATAAAGCTCCCGTCATTTTTATCAAGCGAAGCACATTCACTTTTGAAAGGGCTGCTACAAAAGGATGCAACCAAGCGCCTTGGAAATGGGCTGATGGGTGGCGAGGACATCAAGCGCCATAAATGGTTCAAGCCGATCAATTGGAAGAAATTGGAGTCGAGAGGTATTGAACCAAGTTTTCGGCCTCAAATTGCAGGGAAGCATTGTGTTGCCAACTTTGAGAAGCACTGGACTGACATGCCGATTGCAGATTCTCCTGTCAGCAGTCCCAAGGAAGGTGGGAATGTCTTCATGGGTTTTAGCTACATAAGGTCACCAGCTTCATTCCTTAGTAGGTAG 1431 42.84 MVSSQFPGLTDSCKPKFIQHQFLFPLNSVDAVAVDHVELDFSDIFGPVPFNEVDSANLGLEGERKLVFDDPEVIRNRSHSLVGPSSYVSQSFGLSELTIHESEDSGDQIEFISEDAVGKILEPSNDNRILEGAFEGVVMNSTKAQGVGFDDFEILKVVGAGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKVEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREELARVYAAEIVSAVSHLHDNGIMHRDLKPENILLDIDGHAMLTDFGLAKQFDTNTRNNSMCGTVEYMSPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNRDKVQQKIVKDKIKLPSFLSSEAHSLLKGLLQKDATKRLGNGLMGGEDIKRHKWFKPINWKKLESRGIEPSFRPQIAGKHCVANFEKHWTDMPIADSPVSSPKEGGNVFMGFSYIRSPASFLSR 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19547159 19549566 + Bpe016027.1 Bpe04g01311 103120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01311 476 Gene3D Phosphorylase Kinase; domain 1 150 449 - -
Bpe04g01311 476 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 475 - -
Bpe04g01311 476 Gene3D Transferase(Phosphotransferase) domain 1 232 426 - -
Bpe04g01311 476 SMART serkin_6 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01311 476 CDD STKc_AGC 158 407 IPR045270 GO:0004674|GO:0005524
Bpe04g01311 476 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Bpe04g01311 476 SUPERFAMILY Protein kinase-like (PK-like) 149 464 IPR011009 -
Bpe04g01311 476 Pfam Protein kinase domain 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01311 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Bpe04g01311 476 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe04g01311 476 ProSiteProfiles Protein kinase domain profile. 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01311 476 SMART pkinase_C_6 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe04g01311 476 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 475 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00975 Bpe04g01311 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01311 Bpe-Chr4:19547159 Bpe12g00392 Bpe-Chr12:9344961 8.55E-65 dispersed
Bpe12g00570 Bpe-Chr12:11520406 Bpe04g01311 Bpe-Chr4:19547159 5.35E-175 transposed
Bpe03g00975 Bpe-Chr3:29275513 Bpe04g01311 Bpe-Chr4:19547159 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63321 PF00069 Pkinase 7.60E-74 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01311 K04688 - zju:107431119 701.819