Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01311 | ATGGTTTCCTCACAATTTCCTGGTTTGACGGATTCCTGCAAGCCCAAGTTCATTCAGCATCAGTTTCTTTTTCCTCTCAATTCTGTTGATGCTGTGGCTGTTGACCACGTTGAGCTAGATTTCTCTGATATTTTTGGGCCTGTACCTTTTAATGAAGTTGATTCAGCTAATCTCGGCCTAGAAGGAGAAAGAAAGCTTGTTTTTGATGATCCAGAAGTCATTCGCAACAGGTCACATTCTTTGGTTGGTCCCTCTTCATACGTAAGTCAGTCATTTGGGCTCAGCGAGCTCACTATACATGAGAGTGAGGATTCAGGGGACCAAATTGAATTTATCAGTGAGGATGCTGTTGGAAAAATTCTGGAACCTTCAAATGATAATCGTATACTGGAGGGAGCTTTTGAAGGTGTGGTTATGAATTCCACAAAGGCACAGGGTGTTGGATTCGACGACTTTGAGATTTTAAAGGTTGTTGGCGCTGGTGCTTTTGCAAAAGTTTATCAGGTAAGGAAAAAGGGTACATCAGAGATCTATGCAATGAAAGTTATGCGGAAAGACAAGATCATGGAGAAAAATCACGCTGAATACATGAAAGCAGAGAGGGATATTTTGACAAAAGTTGAACACCCTTACATTGTCCAGCTTAGATACTCCTTTCAAACTAAATATAGACTGTATCTTGTTCTGGATTTCGTAAATGGGGGACACCTTTTCTTTCAGCTTTACCACCAAGGCCTTTTCAGGGAGGAGCTTGCTCGTGTCTATGCTGCTGAGATTGTTTCTGCTGTTTCTCACCTCCACGACAATGGCATAATGCACAGAGATCTGAAACCTGAAAATATTTTACTAGATATTGATGGCCATGCGATGCTGACTGATTTTGGCCTAGCAAAGCAATTTGACACCAATACAAGAAATAATTCTATGTGTGGAACGGTAGAATATATGTCACCTGAAATAGTTCTTGGAAAGGGCCATGATAAGGCTGCAGATTGGTGGAGCGTGGGAATTCTTCTGTTTGAGATGCTCACTGGGAAGCCTCCATTCACTGGGAATAGAGACAAAGTCCAGCAGAAGATAGTAAAGGATAAGATAAAGCTCCCGTCATTTTTATCAAGCGAAGCACATTCACTTTTGAAAGGGCTGCTACAAAAGGATGCAACCAAGCGCCTTGGAAATGGGCTGATGGGTGGCGAGGACATCAAGCGCCATAAATGGTTCAAGCCGATCAATTGGAAGAAATTGGAGTCGAGAGGTATTGAACCAAGTTTTCGGCCTCAAATTGCAGGGAAGCATTGTGTTGCCAACTTTGAGAAGCACTGGACTGACATGCCGATTGCAGATTCTCCTGTCAGCAGTCCCAAGGAAGGTGGGAATGTCTTCATGGGTTTTAGCTACATAAGGTCACCAGCTTCATTCCTTAGTAGGTAG | 1431 | 42.84 | MVSSQFPGLTDSCKPKFIQHQFLFPLNSVDAVAVDHVELDFSDIFGPVPFNEVDSANLGLEGERKLVFDDPEVIRNRSHSLVGPSSYVSQSFGLSELTIHESEDSGDQIEFISEDAVGKILEPSNDNRILEGAFEGVVMNSTKAQGVGFDDFEILKVVGAGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKVEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREELARVYAAEIVSAVSHLHDNGIMHRDLKPENILLDIDGHAMLTDFGLAKQFDTNTRNNSMCGTVEYMSPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNRDKVQQKIVKDKIKLPSFLSSEAHSLLKGLLQKDATKRLGNGLMGGEDIKRHKWFKPINWKKLESRGIEPSFRPQIAGKHCVANFEKHWTDMPIADSPVSSPKEGGNVFMGFSYIRSPASFLSR | 476 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 19547159 | 19549566 | + | Bpe016027.1 | Bpe04g01311 | 103120 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01311 | 476 | Gene3D | Phosphorylase Kinase; domain 1 | 150 | 449 | - | - | |
Bpe04g01311 | 476 | PANTHER | SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 | 1 | 475 | - | - | |
Bpe04g01311 | 476 | Gene3D | Transferase(Phosphotransferase) domain 1 | 232 | 426 | - | - | |
Bpe04g01311 | 476 | SMART | serkin_6 | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g01311 | 476 | CDD | STKc_AGC | 158 | 407 | IPR045270 | GO:0004674|GO:0005524 | |
Bpe04g01311 | 476 | ProSitePatterns | Protein kinases ATP-binding region signature. | 158 | 181 | IPR017441 | GO:0005524 | |
Bpe04g01311 | 476 | SUPERFAMILY | Protein kinase-like (PK-like) | 149 | 464 | IPR011009 | - | |
Bpe04g01311 | 476 | Pfam | Protein kinase domain | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g01311 | 476 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 271 | 283 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe04g01311 | 476 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 408 | 476 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bpe04g01311 | 476 | ProSiteProfiles | Protein kinase domain profile. | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g01311 | 476 | SMART | pkinase_C_6 | 408 | 468 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bpe04g01311 | 476 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 1 | 475 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00975 | Bpe04g01311 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01311 | Bpe-Chr4:19547159 | Bpe12g00392 | Bpe-Chr12:9344961 | 8.55E-65 | dispersed | |
Bpe12g00570 | Bpe-Chr12:11520406 | Bpe04g01311 | Bpe-Chr4:19547159 | 5.35E-175 | transposed | |
Bpe03g00975 | Bpe-Chr3:29275513 | Bpe04g01311 | Bpe-Chr4:19547159 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63321 | PF00069 | Pkinase | 7.60E-74 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01311 | K04688 | - | zju:107431119 | 701.819 |