Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01313 CTAAGAAAAGAAAACTACGATTCTGAGTCCATGGAGATCCCTTTTAAGTTTCATCTCTCGTCGGTTCCGATTTTCCTTTACTTCCTCTGCACCATTCATGCGATTTTGGCTGCTGATTATGTGCCTTCTGATAAGATCTTGATAAACTGTGGGGGGCCTCCCCAGGCTAACGATCCTTACGGCCGGGCATGGGTCACCGATATTGGGTCGGAATTTGCCTCTCCGGTCGGAAACTCCGTAGCATCTAAAGCTACCACCCAAGACCCTTCAGTTTCCGAAGTTCCTTTCATGACTGCTCGTGTTTTCCGCTCAAACTTCACCTATAGTTTTCCCGTCGGAGCCGGACGGCTGTTTGTCCGCCTCTACTTTTACCCTACTTCTTACGAAGGGCTCAACGCATCTAACGCTCTTTTCACCGTCACGGCCAACTCCTATACTCTTCTCAAGAATTTCAGTGCTCTTCAGACGTCACAGGCGTTGAATTTTGCATATATTATGAAGGAATACTCCATTAATGTTCAAGATAAGACTTTGAACATTACCTTCACTCCATCTTCCACTGGTTCCAATGTGTATGCTTTCATCAACGGGATTGAGATCGTGTCTATGCCGGATATTTACAGTGCTACAGACGGCACAACCATGATTGTGGGTCAAAATTCTCCATTTAATATTGATAACACAACAGCCCTGGAGAATGTTTATCGGTTGAACGTGGGAGGGAGCAATATCTTGCCTCCAGCAGATACTGGTCTTTTCAGGATTTGGGTTGATGATTCAGCTTACATCTTCTCTGCAGCTCTTGGGGTAACCTTGGCAGCTGACTCAAACTTCACCATTAAATACCCATCAAGTATGCCTACTTATACAGCACCTCGCGATGTTTATGCCACTGCAAGATCAATGGGTCCGACCACTGCTGTCAACGTGAACTTCAATATGACTTGGGTTTTTGCGATTGATTCTGGATTTTCTTATCTTGTTAGGCTTCATTTCTGTGAGATTACAGACATTATCTATAAGTTTAATCAAAGAGTGTTTCAGATCTTTCTTAACAATCAGACTGCTACTTCTGAGGCAGATGTAATTGCCTGGGCTGGAGGAAATGGGGTTCCTGTGTATAAGGATTATGTTGTGCTTGTTCCAACTGGGAGTCCACGGCAGGATCTGTGGCTTGATCTCCATCCAAACACAGATTCTTCCTCCCAATATTATGACACCATCTTGAATGGTGTGGAGATATTCAAAATTAATGATACAAATGGCAATCTAGGAGGTACAAATCCCATACCAGAGGTACAAGACATAATCGAACCGCCAACAGCCGTATCATCATCCAATCACGGGATATTGGGGAATCGTACGGCTATCATTGCCGGGAGCGTCAGTGGTGGAGTTGTTTTAGCACTTATCGTCGGGTTTTTTCTCGTTACTGCTTCCCGTCGACGGAAGCAGGCGAAGGAATCAAGTGCAAGTGAAGGGCCATCTGGGTGGCTTCCTCTTTCGCTATACGGGAATTCACACTCTGCTGGCTCTGCAAAGACAAACACTACCGGAAGTTATGCATCGTCCCTCCCGTCAAACCTTTGTCGGCACTTCTCATTCACTGAAATCAAGGCTGCCACCAAGAACTTCAATGAATCCTTACTTCTCGGAGTGGGAGGATTTGGTAAGGTTTACAAGGGAGAAATTGATGGTGGTACAACTAAAGTTGCCATTAAGCGGGGAAATCCACTCTCCGAGCAAGGGGTTCATGAGTTCCAAACTGAAATTGAAATGCTTTCGAAGCTTCGCCATCGCCACCTTGTTTCGCTGATTGGCTATTGTGAGGAAAACTGTGAGATGATCCTTGTCTATGATTACATGGCCCACGGAACTCTCCGTGAGCATCTGTACAAGACCCAAAAGCCGCCATTGCCATGGAAGCAGAGGCTTGAGATATGTATCGGAGCTGCTCGGGGTTTGCATTATCTCCACACTGGCGCTAAGCATACGATTATTCATCGAGATGTAAAAACAACCAACATTCTGTTGGACGAGAAGTGGGTGGCTAAGGTTTCAGATTTTGGATTGTCGAAAACAGGTCCCACATTGGACAATACACATGTCAGCACCGTCGTAAAGGGTAGTTTCGGGTACTTGGATCCAGAATACTTCAGGCGACAACAGCTCACAGACAAATCTGATGTTTACTCATTCGGAGTTGTTCTTTTCGAGATTTTGTGTGCTCGTCCAGCACTAAATCCGAGTCTTCCAAAGGAGCAAGTCAGTTTGGCTGAGTGGGCTGCACACTGCCACAAGAAAGGTATTCTCGAGCAGATGATTGACCCTCTCCTGAAAGGGAAGATTGCGCAAGAATGTTTCAAGAAATTCACAGAGACTGCAATGAAATGCGTGGCTGACCAAGGCATCGACAGGCCGTCGATGGGAGATGTGTTATGGAACCTAGAGTTTGCCTTGCAGTTGCAGGAGAGTGCGGAAGAGAGTGGCAAGGTTCTTAACGGGGTGGCAGCAGAGGAGGATCAATTCGACGGAGAAACTAAAGGGAAGAAGGATCCACATACTTTTCCTGGGTTCGAAGACAATGTAATGGACTCGAGCAGTGGGATAAGCATGAGCATAGGCGGCCGGAGCCTGGCCAGCGAAGATTCCGATGGGTTGACCCCAAGCACGGTTTTCTCACAGATAATGAACCCGAAAGGGCGCTGA 2709 46.44 LRKENYDSESMEIPFKFHLSSVPIFLYFLCTIHAILAADYVPSDKILINCGGPPQANDPYGRAWVTDIGSEFASPVGNSVASKATTQDPSVSEVPFMTARVFRSNFTYSFPVGAGRLFVRLYFYPTSYEGLNASNALFTVTANSYTLLKNFSALQTSQALNFAYIMKEYSINVQDKTLNITFTPSSTGSNVYAFINGIEIVSMPDIYSATDGTTMIVGQNSPFNIDNTTALENVYRLNVGGSNILPPADTGLFRIWVDDSAYIFSAALGVTLAADSNFTIKYPSSMPTYTAPRDVYATARSMGPTTAVNVNFNMTWVFAIDSGFSYLVRLHFCEITDIIYKFNQRVFQIFLNNQTATSEADVIAWAGGNGVPVYKDYVVLVPTGSPRQDLWLDLHPNTDSSSQYYDTILNGVEIFKINDTNGNLGGTNPIPEVQDIIEPPTAVSSSNHGILGNRTAIIAGSVSGGVVLALIVGFFLVTASRRRKQAKESSASEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFTEIKAATKNFNESLLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPSLPKEQVSLAEWAAHCHKKGILEQMIDPLLKGKIAQECFKKFTETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEESGKVLNGVAAEEDQFDGETKGKKDPHTFPGFEDNVMDSSSGISMSIGGRSLASEDSDGLTPSTVFSQIMNPKGR 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19575696 19578404 + Bpe016029.1 Bpe04g01313 103122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01313 902 Gene3D Transferase(Phosphotransferase) domain 1 622 840 - -
Bpe04g01313 902 SMART serkin_6 545 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01313 902 CDD STKc_IRAK 551 817 - -
Bpe04g01313 902 SUPERFAMILY Protein kinase-like (PK-like) 519 819 IPR011009 -
Bpe04g01313 902 MobiDBLite consensus disorder prediction 841 858 - -
Bpe04g01313 902 ProSiteProfiles Protein kinase domain profile. 545 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g01313 902 MobiDBLite consensus disorder prediction 861 902 - -
Bpe04g01313 902 Pfam Malectin-like domain 48 417 IPR024788 -
Bpe04g01313 902 ProSitePatterns Protein kinases ATP-binding region signature. 551 574 IPR017441 GO:0005524
Bpe04g01313 902 PANTHER OS07G0166700 PROTEIN 29 854 IPR045272 GO:0004714|GO:0006468
Bpe04g01313 902 Gene3D Phosphorylase Kinase; domain 1 530 621 - -
Bpe04g01313 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Bpe04g01313 902 Gene3D - 230 418 - -
Bpe04g01313 902 Gene3D - 45 204 - -
Bpe04g01313 902 Pfam Protein tyrosine and serine/threonine kinase 550 813 IPR001245 GO:0004672|GO:0006468
Bpe04g01313 902 MobiDBLite consensus disorder prediction 840 902 - -
Bpe04g01313 902 PANTHER - 29 854 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01313 Bpe-Chr4:19575696 Bpe11g01326 Bpe-Chr11:9916298 0 dispersed
Bpe08g00578 Bpe-Chr8:4053830 Bpe04g01313 Bpe-Chr4:19575696 3.67E-69 dispersed
Bpe14g01035 Bpe-Chr14:7733530 Bpe04g01313 Bpe-Chr4:19575696 6.85E-71 dispersed
Bpe04g01313 Bpe-Chr4:19575696 Bpe15g00855 Bpe-Chr15:18542663 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63322 PF12819 Malectin_like 1.00E-44 CL0202 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01313 - - pxb:103930225 1380.16