Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01322 ATGGATCCGCGTTGTAAAGGGTACTCCTATTCCATAAAAGACATTCAATTGAGCAACCAATCTTTATTAGTTCATCCCAATCCGAATGCTGTAGTTGGGCCCAGATTTGAAAACGCCATTTTAGATCATAGAGTTGACGAACTTCATTATCTTCCACCTGATCCCCCACCTAGCAATGTGGTATCTAGTTCGAGTAATATCACTTCATGTTCGAGTGCGAGCCACGACGAAAATTCACCCGAAGATTGTGATTTTTCCGATGCTGTTTTGGGGTACATCAGCCAGATTCTCATGGAAGAAGATATGGAGGAGAAAACTTGTATGCTTCAAGACTCTTTGGATCTTCAAGCCGCTGAGAAATCATTTTATGATGTTCTTGGCGAAAAGTATCCTCCTCATGATCAGGACAGACCTTATAGTAGTCAATACAATGAAATTTTAGATGATAATTCATTTGGAAATTATTATAACTATCTCACTAATATTTATGGAGAAAGTGCTTACTTTGGGAATGATACTCATAATAAACTCCTTGTTGAAGATTTCTCACAGATAGATAGCCTACCTTCTTGTGTTATAGATCAGTCAGTATGTAGCTCTTCAAACAGCGTTATTAGCAGCTTCGACAACCGGCTTGTGGACTCTTCAAACAGTTCTTTTTCGGTTCCTGAATCTAGTAATGGAAGCCAATCAATATGGCAGTTCAGGAAAGGGGTTGAAGAGGCGAATAAATTTCTACCAAATGAAAATGGTTTATTTCTTAATCAAGGGGCAGAGGCCAGTGAGGTCGTCGTCAAGGTGGAGACTAGGGAAGGCAATGAGTTGTTACCGCTCGAATCGAGGGGAAGAAAGAATCCTCTCAGGGAAGATGGAGATTTGGAAGAGAAGAGAAGTAATAAGCTAGCGGCTATTTTTGCCGACTCAACTTTACGATCTGAGATGTTTGACAATGTCTTACTTTGTAGTGCAGGCGAAGGGATGCGAAAATTGGCAGCTCTTCGCGATTATTTACAGATGGCGAAACGGAAAACTTTGGAGCAGAACAGACAATCAAAGGGGTATAACGTAGGGAGGGGCCGAGGGAAGAAACAGAACAGGAAGAAGGAGGTGGTGGATTTGAGAACTTTGTTAATTCACTGTGCACAGGCTGTTGCTGCTGATGATCATAGGAATGCAAATGAATTGCTCAGGCAAATTAGGCAGCATTCGTCTCCTTTTGGAGACGGAAACCAAAGGTTAGCTCACTGTTTTGCGGAAGGGCTCGAGGCCAGGTTGGCTGGCATAGGAAGCCAGATATATAAAGGTCTTGTCAGTAAGAGAAGATGTGCTGCAGATCTGTTGAAAGCTTACCATTTATACCTGGCAGCCTGTCCGTTTAGGAAAATGTCAAATTTTACTTCCAATAAGACAATAATGGGTATTGCAGCAAATTCAAGCAGACTTCATGTCATAGACTTTGGAATTCTTTATGGATTTCAATGGCCAACCCTTATTCAGAGACTCTCATGGAGAAAAGGCGGTCCTCCAAAGCTTCGAATCACTGGAATTGAGTTTCCCCAGCCGGGTTTTCGACCGGCTGATCGTGTGGAGGAAACAGGCCGTCGTTTGTCGGCTTATGCAGAAACTTTCAAGGTGTCGTTTGAGTACAATGCCGTAGCGAAAAACTGGGAGAGCGTTACCATTGACGATCTCAAGATAGAAGGCGACGAAGTCTTGGTCGTCAACTGTCTGTACCGAGCAAAGAACTTGCACGATGAGAGTGTGGCAGTGGAAAGTGCCCGAAATAAGTTTCTTCAAATTGTACGCAAAATAAATCCAAACATCTTCATCTTTGGTGCTGTCAACGGATCGTATAATGCCCCCTTCTTCGTTACTCGTTTTCGAGAGGCACTCTTCCACTATTCTGCGCTGTTTGACATGCTTGAAACTGTCGTCCCGCGGGAGGATGGAGAGAGAATGTTGATCGAGAAAGAAATCTTTGGTCGAGAAGCTTTGAATGTTATTGCATGCGAAGGTTGGGAGAGAGTCGAAAGACCAGAGACCTATAAGCAGTGGCAGGTTCGAATCATGAGGGCCGGATTCTTGCAGCTTGAAGTACACAGAGAGATAATAAAGGGTGCAAAGGAGAAAGTAAACACAAGTTACCACAAGGATTTTGTAATCGACGAAGATAGCAAATGGATGCTACAGGGATGGAAGGGAAGAACTATATATGCCCTCTCTGCTTGGAAACCTGTTTAG 2241 43.15 MDPRCKGYSYSIKDIQLSNQSLLVHPNPNAVVGPRFENAILDHRVDELHYLPPDPPPSNVVSSSSNITSCSSASHDENSPEDCDFSDAVLGYISQILMEEDMEEKTCMLQDSLDLQAAEKSFYDVLGEKYPPHDQDRPYSSQYNEILDDNSFGNYYNYLTNIYGESAYFGNDTHNKLLVEDFSQIDSLPSCVIDQSVCSSSNSVISSFDNRLVDSSNSSFSVPESSNGSQSIWQFRKGVEEANKFLPNENGLFLNQGAEASEVVVKVETREGNELLPLESRGRKNPLREDGDLEEKRSNKLAAIFADSTLRSEMFDNVLLCSAGEGMRKLAALRDYLQMAKRKTLEQNRQSKGYNVGRGRGKKQNRKKEVVDLRTLLIHCAQAVAADDHRNANELLRQIRQHSSPFGDGNQRLAHCFAEGLEARLAGIGSQIYKGLVSKRRCAADLLKAYHLYLAACPFRKMSNFTSNKTIMGIAANSSRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPADRVEETGRRLSAYAETFKVSFEYNAVAKNWESVTIDDLKIEGDEVLVVNCLYRAKNLHDESVAVESARNKFLQIVRKINPNIFIFGAVNGSYNAPFFVTRFREALFHYSALFDMLETVVPREDGERMLIEKEIFGREALNVIACEGWERVERPETYKQWQVRIMRAGFLQLEVHREIIKGAKEKVNTSYHKDFVIDEDSKWMLQGWKGRTIYALSAWKPV 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19668540 19670780 - Bpe016038.1 Bpe04g01322 103131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01322 746 MobiDBLite consensus disorder prediction 60 76 - -
Bpe04g01322 746 ProSiteProfiles GRAS family profile. 364 744 IPR005202 -
Bpe04g01322 746 MobiDBLite consensus disorder prediction 348 367 - -
Bpe04g01322 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 745 IPR005202 -
Bpe04g01322 746 MobiDBLite consensus disorder prediction 49 80 - -
Bpe04g01322 746 Pfam GRAS domain family 373 744 IPR005202 -
Bpe04g01322 746 PANTHER SCARECROW-LIKE PROTEIN 9 40 745 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00125 Bpe-Chr1:740163 Bpe04g01322 Bpe-Chr4:19668540 2.12E-163 dispersed
Bpe04g01322 Bpe-Chr4:19668540 Bpe08g00098 Bpe-Chr8:534774 0 dispersed
Bpe04g01322 Bpe-Chr4:19668540 Bpe15g01283 Bpe-Chr15:21191189 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21326 PF03514 GRAS 1.20E-120 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01322 - - cit:102622070 940.643