Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01342 TTTTCTGCCACTTTCTTCCACCCATTTCTTGATTCTGCTGCGCGGGGATCGACTGCAATCATCATGGGTGCGATAAGGGCCGCCATAGCTGACGGAGTGCTGACGTTTATGTGGATTTTTTGTGCTTCCTCGATTGGGGCTCTTACTGCCGTCGTGTCCTCCGCCGTTGGAGTTTCCGGCCTTCCTCTCCTTTCCATATTCATAACCACTGTCATTATTTTCCTCCTCGTCTTCTTTTTCAACTTCGTCGGCAGCCTCTTGGGTGGGGCTAGCTTCAATCCCACCGGGACCGCCGCCTTCTACGCTGCCGGCCTTGGCCCCGATTCTCTAATTTCCATGGCCCTTCGCTTTCCTGCTCAGGCTGCCGGAGCTGTCGGGGGTGCGGTAGCGATCAAGGAGGTGATGCCGACACAGTACAAACACATGCTTGGTGGTCCTTCTCTGAAAGTTGAGGTCCATTCCGGAGCCATAGCCGAGGCAATTTTGACGTTTTGCATTAGCTTGGCCGTCCTTCTGATCGTGCTCAGAGGCCCCCGCAGCCCGCTTCTCAAGGCCTGGTTTCTGGCCATGGCCACCGTTATCTTGGTCATCTCTGGATCTTCTTATACAGGACCTTCCATGAATCCTGCAAATGCGTTCGGGTGGGCCTATGTGAACAACAGGCACAATTCCTGGGAGCACTTTTATGTCTACTGGATCAGCCCCTTTGCCGGTGCAATTACCGCCGCTTGGGTGTATCGGGCGGTGTTTGCTGCAGCAACTCCGGTGAAACAGAAGAAAGCCTGA 786 54.33 FSATFFHPFLDSAARGSTAIIMGAIRAAIADGVLTFMWIFCASSIGALTAVVSSAVGVSGLPLLSIFITTVIIFLLVFFFNFVGSLLGGASFNPTGTAAFYAAGLGPDSLISMALRFPAQAAGAVGGAVAIKEVMPTQYKHMLGGPSLKVEVHSGAIAEAILTFCISLAVLLIVLRGPRSPLLKAWFLAMATVILVISGSSYTGPSMNPANAFGWAYVNNRHNSWEHFYVYWISPFAGAITAAWVYRAVFAAATPVKQKKA 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19977501 19979123 + Bpe016059.1 Bpe04g01342 103151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01342 261 Gene3D Glycerol uptake facilitator protein. 22 260 IPR023271 -
Bpe04g01342 261 SUPERFAMILY Aquaporin-like 21 254 IPR023271 -
Bpe04g01342 261 Pfam Major intrinsic protein 24 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PRINTS Major intrinsic protein family signature 73 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01342 261 PANTHER AQUAPORIN SIP1-1 22 261 - -
Bpe04g01342 261 PANTHER AQUAPORIN SIP1-1 22 261 IPR044222 GO:0015250
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01301 Bpe-Chr3:31509930 Bpe04g01342 Bpe-Chr4:19977501 8.36E-123 dispersed
Bpe04g01342 Bpe-Chr4:19977501 Bpe08g00157 Bpe-Chr8:844091 8.48E-12 dispersed
Bpe04g01342 Bpe-Chr4:19977501 Bpe04g01349 Bpe-Chr4:20028563 3.21E-27 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01342 K09875 - zju:107404040 333.954