Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01349 ATGGCTTCTCCTTTTCGTCTAATCGTTTCCGATTTCATCGTGTCTTTCATGTGGGTATGGTCGGGGGCTCTGATTAAGATGTTTGTGTATGGCGTTCTTGATTTGGGTCGCGAAGTTAAGGGTGAGATCATCAAGGATGCTCTATCGGTTCTGAACATGTATTTCTTTGCGTACTTGGGCAAAGTCACTAATGGCGGATCTTATAATCCTGTCACTGTTTTAGCTCCTGCCATTTCGGGGGATTTTAGCGGCTTCCTGTTCACTGTTGGAACAAGAATTCCTGTCCAGGTAATCGGGTCGATATGTGGTGTTAATCTCATTGTTATGACCTTTCCTGAAATAGGACGAGGGCCAAAACTCCATGTTGACATCTACCGTGGGGCTCTGACGGAAGGGTTGTTAACATTCACCATAGTTATGGTTTATCTTTTCGTCTCTGAAAAGCTCTCTGGAGGTTTCTACACCAAGACTTGGATTAAAAGCCTCTCCAAGTTGACTCTAAATACTCTTGGCTCAGATCTAACTGGCGGTGTGATGAACCCGGCATCTGTGACGGGTTGGTTGTACGCTAGAGGGGACTATGCATCGAAGGAGAACATCCTTGTATACTGGATTGCTCCGATCGAGGCAACAGTGCTTGCCGTTTGGACGTTTAGGTGGCTCAACCGCCAACCGAAAGATGAGAAAGTAAAGGCAAAGCCCAAATCAGAG 711 46.13 MASPFRLIVSDFIVSFMWVWSGALIKMFVYGVLDLGREVKGEIIKDALSVLNMYFFAYLGKVTNGGSYNPVTVLAPAISGDFSGFLFTVGTRIPVQVIGSICGVNLIVMTFPEIGRGPKLHVDIYRGALTEGLLTFTIVMVYLFVSEKLSGGFYTKTWIKSLSKLTLNTLGSDLTGGVMNPASVTGWLYARGDYASKENILVYWIAPIEATVLAVWTFRWLNRQPKDEKVKAKPKSE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20028563 20030572 - Bpe025692 Bpe04g01349 103158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01349 237 Pfam Major intrinsic protein 6 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 Gene3D Glycerol uptake facilitator protein. 2 235 IPR023271 -
Bpe04g01349 237 PANTHER AQUAPORIN SIP2-1-RELATED 5 237 IPR044226 GO:0015267
Bpe04g01349 237 PANTHER AQUAPORIN SIP2-1-RELATED 5 237 - -
Bpe04g01349 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 PRINTS Major intrinsic protein family signature 49 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g01349 237 SUPERFAMILY Aquaporin-like 5 230 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01342 Bpe-Chr4:19977501 Bpe04g01349 Bpe-Chr4:20028563 3.21E-27 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01349 K09875 - rcu:8289527 321.242