Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01356 ATGGAGTTGTTACAGTCATTGGACGTTCAGACTCTTTTTGGTTTAGCTGTAGCTCTTCTAGCCATTGGAGCTGGAGCTCTCTACCTCCTTTTCTTCTCCAGGAAATCAACATCTAGAGGCTGCTTAGATCCTGAGAGATTCAAAGAGTTTAAACTTATCAAGCGCACAAAGCTGAGCCATAATGTGGCAAAATTTACATTTGCTCTTCCAAAACCAACATCAATTTTGGGTCTTCCCATTGGACAACACTTGAGTTGCAGAGGCAAAGACAGTCAAGGAGAAGAGGTTATTAAACCATATACTCCTACCACTTTGGACTCTGATGTAGGATATTTTGAACTGGTCATAAAAATGTATCCTCAAGGAAGAATGTCACATCATTTTAGAGAGATGAGAGTCGGGGATCATCTTTCTGTCAAGGGACCAAAGGGACGATTCAAGTATCGACCTGGTCAAGTTAGAGCATTTGGAATGCTTGCTGGTGGCTCTGGCATTACACCAATGTTCCAAGTTGCTCGTGCAATACTAGAGAACCCGGATGACAAAACAAACGTACACCTCGTATATGCCAATGTTACGTATGAAGATATACTTTTGAAGGAAGAGATTGATTTGCTTGCCTCTAGATATCCAGATCGCTTCAAGATCTACTATGTCTTGAATCAGCCTCCTGAGAGTTGGGACGGAGGTGTCGGTTTCGTATCGAAGGAAATGATTCAAACCCACTGCCCTGCACCTGGAGCCGATATTCAAATTCTAAGGTGCGGTCCTCCGCCGATGAACAAGGCCATGGCAGCTCACCTTGAAGTGCTAGGATATTCGCCGGAGATGCAGTTTCAGTTCTGA 846 43.85 MELLQSLDVQTLFGLAVALLAIGAGALYLLFFSRKSTSRGCLDPERFKEFKLIKRTKLSHNVAKFTFALPKPTSILGLPIGQHLSCRGKDSQGEEVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDHLSVKGPKGRFKYRPGQVRAFGMLAGGSGITPMFQVARAILENPDDKTNVHLVYANVTYEDILLKEEIDLLASRYPDRFKIYYVLNQPPESWDGGVGFVSKEMIQTHCPAPGADIQILRCGPPPMNKAMAAHLEVLGYSPEMQFQF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20146957 20154279 - Bpe016074.1 Bpe04g01356 103165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01356 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Bpe04g01356 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Bpe04g01356 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Bpe04g01356 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Bpe04g01356 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Bpe04g01356 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Bpe04g01356 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
Bpe04g01356 281 Gene3D Translation factors 40 138 - -
Bpe04g01356 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Bpe04g01356 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Bpe04g01356 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Bpe04g01356 281 CDD cyt_b5_reduct_like 50 281 - -
Bpe04g01356 281 Gene3D - 139 281 IPR039261 -
Bpe04g01356 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Bpe04g01356 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
Bpe04g01356 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 277 IPR039261 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01064 Bpe04g01356 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01356 Bpe-Chr4:20146957 Bpe14g00366 Bpe-Chr14:3486910 1.54E-48 dispersed
Bpe08g00318 Bpe-Chr8:1891624 Bpe04g01356 Bpe-Chr4:20146957 1.90E-154 transposed
Bpe13g01064 Bpe-Chr13:16253587 Bpe04g01356 Bpe-Chr4:20146957 1.96E-67 transposed
Bpe03g01064 Bpe-Chr3:29881682 Bpe04g01356 Bpe-Chr4:20146957 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01356 K00326 - csv:101212569 477.633