Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01371 ATGGAAGGAAAAGGTTGTTTTGGCAATTTTGTGGAGAGAGCCAAACCTTACATCGCCATGATTTGTCTTCAGTTTGGCTATGCCGGCATGAATATAATCACTAAGGTTTCTCTTAATCGAGGAATGAGCCACTACGTTCTGGTTGTTTACAGACATGCTTTCGCTACTGCCGCCATAGCTCCTTTTGCTCTTGTTCTTGAAAGGAAAGTTAGACCCAAAATCACATTCCCCATTTTCATGCAGCTTTTTGTTCTGGGACTTCTTGGGCCAGTGATTGATCAAAACTTCTATTACGCTGGACTAAAGTTCACCTCCCCCACCTTCTCCTGCGCCATGAGCAACATGCTTCCTGCAATGACATTTGTCATGGCTGTCATTTTCAGAAGGATGGAGATATTGGACGTGAAGAAAGTAAGGTGTCAAGCAAAATTAGTAGGAACAGTAGTGACAGTTGGTGGGGCTATGTTGATGACGTTATACAAAGGCCATGTGGTGAATTTCTTCTGGTCTGATCATCTTCACCATATCAGCTCCTCTGGAGGTTCAGACAGTGGGAATGGTGATAAAGATTGGGTTAAAGGATCCATTCTTCTGATTATCGCTACTTTTGCATGGGCTTCCTTTTTCATTCTTCAGGCTATAACGTTGAGAAGATATACAGCTCAGCTTTCACTTACTTCTCTGGTTTGCTTTATGGGGACTCTTCAATCCATTGGTGTTACGCTTGTAATGGAACGTAAGCCTTCTGCTTGGGCCATCGGGTGGGACATGAATCTTCTCGCTGCAGCCTATGCTGGGATAGTGTCATCTAGCATTGCATACTATGTTCAAGGGTTGGTGATGCAGAAGAGAGGGCCAGTCTTCGTTACAGCATTCAGTCCATTGATGATGATAATAGTTGCTGTAATGGGTTCTTTCATTCTTGCCGAGAAGATCTACCTTGGAGGGATTCTTGGAGGTCTGCTTATAGTAATGGGGCTGTACGCAGTTCTGTGGGGGAAGTACAAAGAACACAAAGAGAAGGAAGCTGAGGAGGCCATTGTTGATCCAGTAAAAACTGCAGGAAATGGGAAGGCTATAGAGAAGATGGAAGAAGTCGATGACATAGAAATGCAGAAGAATAAAAACGTGTCCACTCCAATGGTGGCCGTTAGTTTTCCAGTTCCTCAGCCTGCCATGTTCGCAAAGGAAGCTCCAAGGTCTTAG 1206 44.28 MEGKGCFGNFVERAKPYIAMICLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFPIFMQLFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVIFRRMEILDVKKVRCQAKLVGTVVTVGGAMLMTLYKGHVVNFFWSDHLHHISSSGGSDSGNGDKDWVKGSILLIIATFAWASFFILQAITLRRYTAQLSLTSLVCFMGTLQSIGVTLVMERKPSAWAIGWDMNLLAAAYAGIVSSSIAYYVQGLVMQKRGPVFVTAFSPLMMIIVAVMGSFILAEKIYLGGILGGLLIVMGLYAVLWGKYKEHKEKEAEEAIVDPVKTAGNGKAIEKMEEVDDIEMQKNKNVSTPMVAVSFPVPQPAMFAKEAPRS 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20319330 20321152 - Bpe016088.1 Bpe04g01371 103180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01371 401 PANTHER WAT1-RELATED PROTEIN 10 363 IPR030184 GO:0016021|GO:0022857
Bpe04g01371 401 Pfam EamA-like transporter family 16 130 IPR000620 GO:0016020|GO:0016021
Bpe04g01371 401 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Bpe04g01371 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 336 - -
Bpe04g01371 401 PANTHER WAT1-RELATED PROTEIN 10 363 - -
Bpe04g01371 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01371 Bpe-Chr4:20319330 Bpe04g01947 Bpe-Chr4:24336689 1.18E-176 dispersed
Bpe04g01371 Bpe-Chr4:20319330 Bpe15g01004 Bpe-Chr15:19548795 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01371 - - twl:120013664 605.905