Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01381 ATGGATAGTAGAACAGTGAATTTTGGTGTTGAGGATGTTAGTAAAACCCGAAAAGTAATGCCGGGATTTGTCTCTCCGATAACAGCCTCAAATCCAGTGCAGGATATATCTTCGTCTTGTATGTCAGATTTCAGAACCCTTGAGCAATCTCTTGGATTTCACATAGAGAATGCTGTTGAACTTTCTATAAATGCTGTTTATAATCAGATGAAGTCAAGTAATCCAATTCTAGGTACAGATAGCCAATTTAACGCTTTAAACAAGACATTAGACTTGCCAAAGGACAGACACCTGGATCCTGTTTCCACATCCGTCACTCAACGTGAGAATTGGGGGGAGTCTAACATGGCAGATGGCAGCCCGAGGACTGATACTTCAACGGATGACACAGATGACAAAAATCAGAGGTTTGATAGAAATCAATTAATTTTGGGCGGAGCATCTGATTCAAATAATGCATCAAAAGAAAAGTCAGGAGATCAGAAGACATTGCGCAGACTTGCTCAAAATCGTGAAGCTGCTAGAAAAAGCAGGTTAAGGAAAAAGGCTTACGTACAACAGCTGGAAAGCAGCAGGCTGAAGTTGACCCAGCTGGAGCAGGAACTGCAGCGGGCACGTCAACAGGGGATATTTATTTCGAGTTCAGGAGATCAATCACATTCGATGAGTGGAAATGGTGCATTAGCCTTCGACGTAGAATATTCTCGTTGGCTAGAAGAGCATAACAGGCAAGTGAATGAGTTGAGGACGGCGGTAAATTCTCACGTGGGCGACACCGAACTACGTACTATTGTCGATATCGTCACCACACAGTTTGATGACATTTTCAGGTTGAAAGGGATTGCGGCCAAAGCTGACGTTTTCCACATTTTGTCCGGAATGTGGCAAACCCCCGCCGAGAGGTGTTTCATGTGGATTGGTGGGTTCCGCTCATCTGAGCTTCTCAAGCTTCTTGCGAGTCAATTGGAACCCCTGACGGAGCAGCAGGGGATGGACATCTGCAAGCTCCAGCAGTCATCACAACAGGCCGAAGATGCTCTGTCCCAAGGAATGGAAGCATTGCAGCAGTCCTTGGCCGAGACGCTGGCTAGTGCGTCCCCCGCATCTTTGGGGCCATCCGGCAACGTGGCAAACTACATGGGCCAAATGGCGATGGCCATGGGAAAGCTAGGAACTCTCGAAGGCTTCCTTCACCAGGCCGATAATCTTCGACAACAAACGCTCCAGCAAATGCACAGGATTTTGACAATTCGGCAATCTGCTCGGGCTTTTCTCGCGATAAATGACTACTTTTCTCGACTCCGAGCCCTCAGTTCACTCTGGCTGGCCAGGCCGCGGGATTGA 1344 47.4 MDSRTVNFGVEDVSKTRKVMPGFVSPITASNPVQDISSSCMSDFRTLEQSLGFHIENAVELSINAVYNQMKSSNPILGTDSQFNALNKTLDLPKDRHLDPVSTSVTQRENWGESNMADGSPRTDTSTDDTDDKNQRFDRNQLILGGASDSNNASKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGALAFDVEYSRWLEEHNRQVNELRTAVNSHVGDTELRTIVDIVTTQFDDIFRLKGIAAKADVFHILSGMWQTPAERCFMWIGGFRSSELLKLLASQLEPLTEQQGMDICKLQQSSQQAEDALSQGMEALQQSLAETLASASPASLGPSGNVANYMGQMAMAMGKLGTLEGFLHQADNLRQQTLQQMHRILTIRQSARAFLAINDYFSRLRALSSLWLARPRD 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20448925 20453818 - Bpe016098.1 Bpe04g01381 103190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01381 447 Coils Coil 181 208 - -
Bpe04g01381 447 Pfam bZIP transcription factor 162 202 IPR004827 GO:0003700|GO:0006355
Bpe04g01381 447 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 160 204 IPR004827 GO:0003700|GO:0006355
Bpe04g01381 447 SMART brlzneu 158 221 IPR004827 GO:0003700|GO:0006355
Bpe04g01381 447 MobiDBLite consensus disorder prediction 103 123 - -
Bpe04g01381 447 Gene3D - 161 212 - -
Bpe04g01381 447 MobiDBLite consensus disorder prediction 124 138 - -
Bpe04g01381 447 CDD bZIP_HBP1b-like 162 214 - -
Bpe04g01381 447 ProSiteProfiles DOG1 domain profile. 227 444 IPR025422 GO:0006351|GO:0043565
Bpe04g01381 447 Pfam Seed dormancy control 244 320 IPR025422 GO:0006351|GO:0043565
Bpe04g01381 447 MobiDBLite consensus disorder prediction 93 165 - -
Bpe04g01381 447 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 48 447 - -
Bpe04g01381 447 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 165 180 IPR004827 GO:0003700|GO:0006355
Bpe04g01381 447 SUPERFAMILY Leucine zipper domain 162 205 IPR046347 GO:0003700|GO:0006355
Bpe04g01381 447 PANTHER TRANSCRIPTION FACTOR TGA9 48 447 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01087 Bpe04g01381 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00560 Bpe-Chr4:3545815 Bpe04g01381 Bpe-Chr4:20448925 4.43E-127 dispersed
Bpe04g01381 Bpe-Chr4:20448925 Bpe11g00859 Bpe-Chr11:6359184 1.38E-110 dispersed
Bpe02g02277 Bpe-Chr2:23591628 Bpe04g01381 Bpe-Chr4:20448925 7.68E-83 transposed
Bpe10g00943 Bpe-Chr10:14979149 Bpe04g01381 Bpe-Chr4:20448925 9.41E-156 transposed
Bpe15g00992 Bpe-Chr15:19459390 Bpe04g01381 Bpe-Chr4:20448925 0 transposed
Bpe03g01087 Bpe-Chr3:30033852 Bpe04g01381 Bpe-Chr4:20448925 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21334 PF14144 DOG1 3.40E-28 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01381 K14431 - mnt:21386980 634.409