Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01386 TGTTTTTCTGTTATGGGTCTTGTTGCTGAATCTCAGTTTCATGTTTTGGCCGTTGATGATAGTCTTATTGATCGAAAACTGATAGAGAGGCTGCTCAAGACCTCGTCGTATCAAGCAGTCACTACTGTTGATTCTGGTTCTAAAGCTTTGGAATTTCTGGGTTTTAATCAAGATGAAAAAACCAACGCCACTATTCCTTCGATTTCTCCGATTAAGGAAGTGGAAGTGAATCTTATCATCACAGATTATTGTATGCCCGGAATGACAGGCTTTGATTTGCTCAAGAAAATCAAGGAGTGTTCATCCTTGAGAAACATACCAGTAGTGATAATGTCGTCGGAGAATGTACCTTCGAGAATCACCAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTCTTGAAACCAGTTCGACTTTCAGACATGAACAGGCTGAAACCCCACATGATGAAAACCAGATCGAAGGATCAAGAACGTGAAAATGGCGATGGATCAGAGAAGAACTGTCAATTTCTAGAACAAAAACAGGCGAGTAATAAGAGGAAAGCCATGGAAGAAGGTCTTTCCCCTGAAAGAACACGACCCAGATACAGTGGCGTTGCCACTGTGATCTGA 612 41.83 CFSVMGLVAESQFHVLAVDDSLIDRKLIERLLKTSSYQAVTTVDSGSKALEFLGFNQDEKTNATIPSISPIKEVEVNLIITDYCMPGMTGFDLLKKIKECSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLSDMNRLKPHMMKTRSKDQERENGDGSEKNCQFLEQKQASNKRKAMEEGLSPERTRPRYSGVATVI 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20525238 20526259 + Bpe016104.1 Bpe04g01386 103195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01386 203 MobiDBLite consensus disorder prediction 177 191 - -
Bpe04g01386 203 ProSiteProfiles Response regulatory domain profile. 14 149 IPR001789 GO:0000160
Bpe04g01386 203 Pfam Response regulator receiver domain 15 141 IPR001789 GO:0000160
Bpe04g01386 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 8 195 - -
Bpe04g01386 203 MobiDBLite consensus disorder prediction 145 165 - -
Bpe04g01386 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 195 IPR045279 GO:0009736
Bpe04g01386 203 SMART REC_2 13 148 IPR001789 GO:0000160
Bpe04g01386 203 CDD REC_typeA_ARR 15 144 - -
Bpe04g01386 203 Gene3D - 14 197 - -
Bpe04g01386 203 SUPERFAMILY CheY-like 12 147 IPR011006 -
Bpe04g01386 203 MobiDBLite consensus disorder prediction 145 203 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01386 Bpe04g00591 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01386 Bpe-Chr4:20525238 Bpe04g01964 Bpe-Chr4:24500677 6.62E-64 dispersed
Bpe02g00640 Bpe-Chr2:4187599 Bpe04g01386 Bpe-Chr4:20525238 6.78E-61 transposed
Bpe04g00591 Bpe-Chr4:3762637 Bpe04g01386 Bpe-Chr4:20525238 2.51E-58 transposed
Bpe06g00339 Bpe-Chr6:14828751 Bpe04g01386 Bpe-Chr4:20525238 9.52E-10 transposed
Bpe08g00899 Bpe-Chr8:11365054 Bpe04g01386 Bpe-Chr4:20525238 8.79E-16 transposed
Bpe03g01093 Bpe-Chr3:30097327 Bpe04g01386 Bpe-Chr4:20525238 8.89E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21335 PF00072 Response_reg 5.40E-20 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01386 K14492 - tcc:18598779 291.967