Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01392 GATAGGCCTTTGTGGTTCCCTGGTAGCACCCCTCCTCCGTGGCTCGACGGCTCCCTCCCCGGAGACTTTGGTTTTGATCCTCTTGGTCTAGGGTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGATAGTTCACTGCAGATGGGCCATGTTAGGCGCTGCCGGTATTTTCATCCCCGAATTTCTCACCAAGATAGGCGTTCTCAACACTCCGTCGTGGTACACTGCCGGCGAGCTAAACTACTTCACCGACACTACTACTCTTTTCATAATCGAGCTCATTTTGATCGGATGGGCGGAGGGGAGAAGATGGGCTGACATCCTCAAGCCTGGAAGCGTCAACACCGACCCCATCTTCCCCAGCAACAAACTCACAGGCACCGACGTCGGATACCCCGGCGGCCTCTGGTTCGACCCTCTCGGGTGGGGAACCGGATCACCGGAAAAGATCAAGGAGCTGAGAACAAAGGAGATAAAGAACGGTAGATTGGCGATGTTGGCCGTGATGGGTGCATGGTTCCAACACATCTACACCGGAACTGGCCCCATCGACAACCTCTTCGCCCACCTCGCCGATCCCGGCCACGCCACCGTTTTCGCTGTAAGTAGACCATCATTCATCACTGAATCTAACAATTTTCCTCGATAA 654 55.05 DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNQQAEIVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELNYFTDTTTLFIIELILIGWAEGRRWADILKPGSVNTDPIFPSNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSRPSFITESNNFPR 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20595917 20596660 + Bpe016111.1 Bpe04g01392 103201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01392 217 SUPERFAMILY Chlorophyll a-b binding protein 2 203 - -
Bpe04g01392 217 Pfam Chlorophyll A-B binding protein 11 177 IPR022796 -
Bpe04g01392 217 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 206 IPR001344 GO:0009765|GO:0016020
Bpe04g01392 217 Gene3D Chlorophyll a/b binding protein domain 12 197 - -
Bpe04g01392 217 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01392 Bpe-Chr4:20595917 Bpe12g00541 Bpe-Chr12:11278473 2.10E-72 dispersed
Bpe03g01097 Bpe-Chr3:30131429 Bpe04g01392 Bpe-Chr4:20595917 5.32E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01392 K08908 - sind:105168418 419.083