Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01408 ATGGAGAAGTATTTGAAGGATTTCGAGGTGGAGCCCAAGCATTCCTCCGACGAAGCTTTGAGGAAGTGGAGATCCGCCGTATCGATCGTAAAAAATCCTGCGCGACGTTTTCGGCATGTTGCGGATCTGGTCAAGCGCTCCGAGGCTGCGAAGAAAAAGCTCAAGATTCAGGAAAAAATTCGGGTTGCTCTCTATGTTCAGAAAGCAGCATTGCAGTTTATTGATGCGGGTGGTCGAGCTGAATACGTTCTCTTGGATGAGACTAGAGAAGCAGGTTTTAATATTAATCCAGATGAACTTGCATCAATAGTCCGAAACCATGATTTTAAGGCCTTTAGATCACATGGCGGAGCTGAAGGGATTGCTAGGAGAGTGTCTGTTTCGCTGAATACTGGTGTCAGTGAGAAGGATGTAGCTTTACGACAGAAGATTTATGGCATTAACCGCTACAGGGAAAAACCTTCAAAATCATTTTTCATGTTTTTGTTTGAAGCATCGCAAGACTTGACACTTATAATACTCATGGTCTGTGCGGTAGTTTCCTTAGGCGTTGGAATCCCCACTGAAGGAATGCCACAGGGAATGTATGATGGTATAGGGATCTTATTCAGTATATTTTTGGTGGTCTTAGTTACATCTGTGAGCGACTACAAACAGTCCTTGCAATTCAAAGAGCTGGATCGGGAGAAGAAAAAAATATTTATCGATTTATGTAGAGATGGATCAAGAAAAAGGGTCTCCATTTATGATGTAGTTGTTGGAGATATTGTTCATTTATCAATTGGAGATCAAGTTCCAGCTGATGGAGTTTTTGTATCAGGATACAGTTTGCTCATTGACGAATCAAGCTTATCAGGAGAGACTGAACCAGTGAACATGTATGAAGAGAAACCATTTCTTCTAGCAGGTACTAAAGTGCAAGATGGGTCTGCAAAAATGCTGGTGACAGCTGTTGGTATGAGAACTGAATGGGGAAAGTTGATGGAAACCCTGAATGAGGGAGGAGAAGATGAAACTCCATTGCAGGTGAAGTTAAATGGTGTTGCAACGCTTGTTGGAAAAATTGGTTTGACCTTCGCTGTGGTGACATTTTTGGTGTTGATTGTGAGGTTTCTGGTTGAAAAATACCTGCAACACACTCTAGGAGATTGGTCTTCAAGTGATGCACTTCAGCTTCTTAACTTCTTTGCTATCGCTGTGACCATAGTTGTGGTTGCAGTTCCTGAAGGATTACCACTGGCAGTGACACTTGGTCTTGCGTTCGCTATGAAGAAATTAATGGATGAAAAAGCACTTGTGAGGCATCTCTCTGCATGTGAGACAATGGGTTCTGCTAGTTGTATTTGCACAGACAAGACAGGGACATTGACCACTAATCATATGGTTGTAGATAGAATATGGATTTGTGGAAAATCTTTTGGGATTAAACACAGTGAGAGTAATGGAGTTCTGAGATCAGAGATATCTGACGGCATTATGAACATCCTTCTGCAGTCTATTTTACAAAATACAAGTTCTGAAGTGTCAAAAGATAAAGATGGACAGAACTCCATTGTGGGAGGATCTCCAACGGAGTCAGCATTGTTAGAATTTGGCCTGTTTCTAGGTGGCGATTTTGATGCCCTGAGAAGAGAATTTAAAATACTTAAGATTGAGCCTTTCAATTCTGTCAGGAAGAAGATGTCCATTCTTGTCGCTCTTCCTAATGGCGGAACACGAGTTTTTTGCAAAGGGGCATCAGAAATAGTTCTAAGAATGTGTGACAAGATTGTTGATGACAATGGAAATGCTGCTCAGTTAACTGAAGAACAGGTAAGAACTGTCTCAGACACCATCAATGGTTATGCTTGTGAAGCACTGAGAACCATAGGTTTGGCTTTTAAAGATACAGATTACTCTTCCAGTGGAAATTCATTTCCAGATAGTGGCTTCACATTTTTGGCAGTTGTTGGAATCAAGGATCCTGTGCGTCCTGGAGTGAAGGATGCTGTCAAAACTTGTTTGGACGCTGGAATAACAGTTCGAATGGTCACAGGTGATAACATACACACAGCCAAGGCCATAGCTAAAGAATGTGGCATCCTTACGCCAGATGGTTTGGCCATCGAAGGACCAGATTTTCGTAACTTGTCTCCTGTGCAGATGAAGGAAATTATCCCCAAACTCCAGGTAATGGCTCGATCATTGCCGTTGGATAAGTATACATTGGTTTCCAATCTGAGAAAAACATTTGGCGAGGTTGTTGCAGTGACAGGAGACGGGACAAATGATGCCCCTGCCTTGCATGAGTCAGACATTGGATTCGCTATGGGCATTGCTGGAACCGAGGTTGCCAAAGAAAATGCTGATGTTATCATAATTGACGATAATTTTGCAACTATTGTAAATGTTGCCAAATGGGGACGCTCAGTTTATATCAACATTCAAAAGTTTGTGCAGTTTCAACTAACAGTTAACATTGTTGCTTTAGTGATCAATTTTGTTTCGGCATGCATTTCAGGATCTGCTCCTCTAACTGCTGTGCAATTGCTTTGGGTCAACTTAATCATGGACACTCTTGGTGCATTAGCACTTGCCACGGAGCCTCCAAACGATGATCTAATGAAAAGACGCCCTGTACTAAAGGGTATGAGTTTCATTACCAAAACCATGTGGAGGAATATTATTGGCCAAAGCATTTATCAGCTAACTGTTCTTGGTGTTCTTAATTTTGCTGGAAAGAGACTTTTAGGACTTGGTGGCTCTGATGCCACTGATGTTTTGAACACTTTGATATTCAACGCCTTCGTGTTTTGTCAGGTGTTTAATGAAATAAACAGCCGTGAAATCGAGAATATCAACATTTTCCGTAGCCTGTTCGACAGCTGGATATTCATTGCTATCGTAGTCTCAACAGCTGCATTTCAAGTGATAATCGTCGAATTTTTAGGCGATTTTGCAAGCACAGTGCCACTGAGCTGGAAATTTTGGGTACTAAGTATAGTGATTGGATTTGTTGGCATGCCTATTGCTGTAGTCTTGAAATGCATCCCAGTTGAAAGAACTTCAACCAAGCATCATGAAGGTTACGATCCGCTCCCTTCCGGCCCGGAATTGGCTTGA 3102 41.88 MEKYLKDFEVEPKHSSDEALRKWRSAVSIVKNPARRFRHVADLVKRSEAAKKKLKIQEKIRVALYVQKAALQFIDAGGRAEYVLLDETREAGFNINPDELASIVRNHDFKAFRSHGGAEGIARRVSVSLNTGVSEKDVALRQKIYGINRYREKPSKSFFMFLFEASQDLTLIILMVCAVVSLGVGIPTEGMPQGMYDGIGILFSIFLVVLVTSVSDYKQSLQFKELDREKKKIFIDLCRDGSRKRVSIYDVVVGDIVHLSIGDQVPADGVFVSGYSLLIDESSLSGETEPVNMYEEKPFLLAGTKVQDGSAKMLVTAVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATLVGKIGLTFAVVTFLVLIVRFLVEKYLQHTLGDWSSSDALQLLNFFAIAVTIVVVAVPEGLPLAVTLGLAFAMKKLMDEKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDRIWICGKSFGIKHSESNGVLRSEISDGIMNILLQSILQNTSSEVSKDKDGQNSIVGGSPTESALLEFGLFLGGDFDALRREFKILKIEPFNSVRKKMSILVALPNGGTRVFCKGASEIVLRMCDKIVDDNGNAAQLTEEQVRTVSDTINGYACEALRTIGLAFKDTDYSSSGNSFPDSGFTFLAVVGIKDPVRPGVKDAVKTCLDAGITVRMVTGDNIHTAKAIAKECGILTPDGLAIEGPDFRNLSPVQMKEIIPKLQVMARSLPLDKYTLVSNLRKTFGEVVAVTGDGTNDAPALHESDIGFAMGIAGTEVAKENADVIIIDDNFATIVNVAKWGRSVYINIQKFVQFQLTVNIVALVINFVSACISGSAPLTAVQLLWVNLIMDTLGALALATEPPNDDLMKRRPVLKGMSFITKTMWRNIIGQSIYQLTVLGVLNFAGKRLLGLGGSDATDVLNTLIFNAFVFCQVFNEINSREIENINIFRSLFDSWIFIAIVVSTAAFQVIIVEFLGDFASTVPLSWKFWVLSIVIGFVGMPIAVVLKCIPVERTSTKHHEGYDPLPSGPELA 1033
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20754463 20763349 - Bpe016128.1 Bpe04g01408 103217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01408 1033 SFLD Haloacid Dehalogenase 431 803 - -
Bpe04g01408 1033 SMART Cation_ATPase_N_a_2 112 186 IPR004014 -
Bpe04g01408 1033 Gene3D - 459 655 IPR023299 GO:0000166
Bpe04g01408 1033 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 472 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g01408 1033 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 839 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g01408 1033 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 547 695 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g01408 1033 PANTHER CALCIUM-TRANSPORTING ATPASE 6 1019 - -
Bpe04g01408 1033 Gene3D - 446 796 IPR023214 -
Bpe04g01408 1033 Gene3D - 131 332 - -
Bpe04g01408 1033 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 108 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bpe04g01408 1033 PANTHER CATION TRANSPORTING ATPASE 6 1019 - -
Bpe04g01408 1033 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 652 IPR023299 GO:0000166
Bpe04g01408 1033 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g01408 1033 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g01408 1033 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe04g01408 1033 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Bpe04g01408 1033 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Bpe04g01408 1033 Gene3D - 15 76 - -
Bpe04g01408 1033 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1013 IPR023298 -
Bpe04g01408 1033 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Bpe04g01408 1033 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Bpe04g01408 1033 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Bpe04g01408 1033 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Bpe04g01408 1033 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Bpe04g01408 1033 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Bpe04g01408 1033 SUPERFAMILY Calcium ATPase, transduction domain A 237 330 IPR008250 -
Bpe04g01408 1033 Pfam Cation transport ATPase (P-type) 501 590 - -
Bpe04g01408 1033 Pfam E1-E2 ATPase 237 427 - -
Bpe04g01408 1033 SFLD p-type atpase 431 803 IPR044492 -
Bpe04g01408 1033 CDD P-type_ATPase_Ca_PMCA-like 138 884 - -
Bpe04g01408 1033 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Bpe04g01408 1033 Pfam Cation transporter/ATPase, N-terminus 115 181 IPR004014 -
Bpe04g01408 1033 SUPERFAMILY HAD-like 448 856 IPR036412 -
Bpe04g01408 1033 Gene3D - 164 1009 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01107 Bpe04g01408 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01408 Bpe-Chr4:20754463 Bpe13g00128 Bpe-Chr13:8265134 0 dispersed
Bpe13g01096 Bpe-Chr13:16486021 Bpe04g01408 Bpe-Chr4:20754463 0 transposed
Bpe03g01107 Bpe-Chr3:30189882 Bpe04g01408 Bpe-Chr4:20754463 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01408 K01537 - jre:109010491 1565.82