Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01411 ATGGCTTCTTCCTCCTCTGATCCTAGTTTGAAGCACGAAGTTGGAGGCAGCAGCGGAGGAGGAGACGAGAATTCGGAGGCTGTCGTAGCTAACGACCAGCTTTTGCTTTACAAAGGGTTGAAGAAAGCAAAGAAAGAGAGAGGATGCACGGCCAAAGAGAGAATCAGCAAAATGCCTCCCTGTGCTGCTGGAAAGCGGAGTTCCATTTATCGCGGAGTGACCAGGCATAGATGGACGGGTCGTTATGAAGCTCATCTTTGGGATAAGAGTACTTGGAACCAAAACCAAAACAAGAAGGGAAAACAAGGTGCATACGATGAAGAGGAAGCTGCAGCTAGGGCATATGATCTTGCTGCGTTAAAGTACTGGGGTCCTGGAACCCTCATTAATTTTCCAGTAACTGACTACACAAGGGATCTTGAAGAGATGCAAAATGTATCAAGAGAGGAGTACCTTGCATCTTTAAGAAGAAAGAGCAGTGGTTTCTCAAAAGGAATATCTAAATATCGTGGACTCTCGAGTCGATGGGAGTCATCATTTGGTCGGGTGGCTGGATCTGAGTACTTCAACAGCATAAATTATGGTACAAGTGATGATCCAGCCGCAGAGGGAGAATTTATAAATAACTTCTGTATCGAAAGGAAGATCGACTTGACAAGTTACATTAGATGGTGGGGGCCTAACAAAACTCGTCAAGTGGATCGCAGCTCAAGATCAAACGAAGAAACTAAACATAGTTGTGCTGGAGAGGTTGAAAGTGAGCTTAAAAGTATGGAATGGCAAGTTCAACATACTGAGCCATATGAAATGCCACGTTTGGGAATATATCACGACAGAAAGAAACAGAAAGGCTTCAAAGTCTCTGCCTTAAGCATCTTGTCTCGTTCAGCTGCCTACAAGAGCTTGCAAGAGAAAGCATTGAAATTGCAGGAAAATGGCAATGAGAATTATCAAAATGAGAACAAAAATACTGTTAAAATGGACCATGGTAAGACAGTTGAGAAATCTGATGATCAGATTGGTAGTGAGAAATTTGGAGTTGCCCAAGGAATGAGCGGAGGATTGGCTATTCAAAGAAATATTTTCCCATTGACCCCATTCTTAACAGCGCCACTTCTGACGAGTTATAGTAATGTTGATCCATTAGTTGATCCCATTCTTTGGTCATCTATGGTTCCTGTTCTTCCTGCTGAACTTCCTCGTCCAGCTGAGGTTTCAAAGACAGAGACTACTTCAACGTATGCGTTATTTCAACATGACAAATGA 1266 42.97 MASSSSDPSLKHEVGGSSGGGDENSEAVVANDQLLLYKGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSKGISKYRGLSSRWESSFGRVAGSEYFNSINYGTSDDPAAEGEFINNFCIERKIDLTSYIRWWGPNKTRQVDRSSRSNEETKHSCAGEVESELKSMEWQVQHTEPYEMPRLGIYHDRKKQKGFKVSALSILSRSAAYKSLQEKALKLQENGNENYQNENKNTVKMDHGKTVEKSDDQIGSEKFGVAQGMSGGLAIQRNIFPLTPFLTAPLLTSYSNVDPLVDPILWSSMVPVLPAELPRPAEVSKTETTSTYALFQHDK 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20795378 20799282 - Bpe016131.1 Bpe04g01411 103220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01411 421 ProSiteProfiles AP2/ERF domain profile. 69 132 IPR001471 GO:0003700|GO:0006355
Bpe04g01411 421 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Bpe04g01411 421 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Bpe04g01411 421 MobiDBLite consensus disorder prediction 1 25 - -
Bpe04g01411 421 PANTHER BNAA03G19580D PROTEIN 2 420 - -
Bpe04g01411 421 Pfam AP2 domain 69 124 IPR001471 GO:0003700|GO:0006355
Bpe04g01411 421 Gene3D AP2/ERF domain 69 134 IPR036955 GO:0003700|GO:0006355
Bpe04g01411 421 MobiDBLite consensus disorder prediction 234 250 - -
Bpe04g01411 421 SUPERFAMILY DNA-binding domain 68 133 IPR016177 GO:0003677
Bpe04g01411 421 SMART rav1_2 69 138 IPR001471 GO:0003700|GO:0006355
Bpe04g01411 421 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 420 - -
Bpe04g01411 421 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01411 Bpe-Chr4:20795378 Bpe13g00463 Bpe-Chr13:12161863 4.73E-62 dispersed
Bpe04g01411 Bpe-Chr4:20795378 Bpe14g00190 Bpe-Chr14:2219259 1.13E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21337 PF00847 AP2 6.60E-10 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01411 K09285 - cit:102624476 620.542