Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g01426 | ATGGGAACTCCGGAATTCCCAGATCTTGGAAAGCATTGTAGCGTTGAAGATTGCAAACTGATTGATTTCTTGCCCTTCACCTGTGATCGCTGCCGCCAGGTTTTTTGTTTAGAGCATAGGAGCTACATTAAGCATAATTGTCCCAAAGCCGACAAAAAAGACGTCACTGTCGTCATTTGTCCGCTCTGTGCAAATGGAGTTCGTCTAATTCCCGACGAAGATCCGAACATTACATGGGACAGACACGTCAACTCTGAATGCGATCCATCAAATTACGAGAAAGCGACAAAGAAGAAAAAGTGCCCGGTTCCTGGCTGCAGGGAAACCTTAACATTCTCAAACACGATTAAGTGCAGGGATTGCTTGGTAGACCATTGTTTGAAGCACAGATTTGGACCCGACCATAAATGTCCTGGACCGAAGAAACCAGAAGCAAGTTTTCCATTTATTGGTCTTTTAAGTCGGAGTGTAAAAGAAGATCCGAAGCCTAACCGGGGACCTAAGACATCTTCTTCGCCTAAGTGGGCTACAAGCTTTCTCAATGCAGCCTCCACTGGTATAGGGAAAATAAGCGGGGAGATTAGCCAAGCTTGGCAGATTGCTCGAGATGGGGTTGGATCCAGCAGCTCAAATTTTGGTGGAAATAAACAGGAGGAATGCCCACAATGCCATGCAAGATTTTCTTCTTTGACGACTCTGGTAGAACACGTTGAAAAAGTGCACGAAAAGAGTAGAAAGGTTGTCGATGTCTGTCCAAAGTGTAGTCAGGGATTTCGGGATCCAGTTGCGCTTGTAGAACACGTCGAAAGAGATCACGGCGGAACTTCAAAGGCTTAG | 837 | 45.76 | MGTPEFPDLGKHCSVEDCKLIDFLPFTCDRCRQVFCLEHRSYIKHNCPKADKKDVTVVICPLCANGVRLIPDEDPNITWDRHVNSECDPSNYEKATKKKKCPVPGCRETLTFSNTIKCRDCLVDHCLKHRFGPDHKCPGPKKPEASFPFIGLLSRSVKEDPKPNRGPKTSSSPKWATSFLNAASTGIGKISGEISQAWQIARDGVGSSSSNFGGNKQEECPQCHARFSSLTTLVEHVEKVHEKSRKVVDVCPKCSQGFRDPVALVEHVERDHGGTSKA | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 20922583 | 20924047 | - | Bpe016145.1 | Bpe04g01426 | 103235 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g01426 | 278 | ProSiteProfiles | Zinc finger AN1-type profile. | 7 | 55 | IPR000058 | GO:0008270 | |
Bpe04g01426 | 278 | Gene3D | - | 2 | 59 | IPR035896 | - | |
Bpe04g01426 | 278 | SUPERFAMILY | AN1-like Zinc finger | 6 | 50 | IPR035896 | - | |
Bpe04g01426 | 278 | SMART | c2h2final6 | 99 | 129 | IPR013087 | - | |
Bpe04g01426 | 278 | SMART | c2h2final6 | 249 | 272 | IPR013087 | - | |
Bpe04g01426 | 278 | SMART | c2h2final6 | 218 | 241 | IPR013087 | - | |
Bpe04g01426 | 278 | SUPERFAMILY | AN1-like Zinc finger | 93 | 145 | IPR035896 | - | |
Bpe04g01426 | 278 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 1 | 278 | - | - | |
Bpe04g01426 | 278 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 220 | 241 | IPR013087 | - | |
Bpe04g01426 | 278 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 218 | 246 | IPR013087 | - | |
Bpe04g01426 | 278 | Gene3D | - | 81 | 147 | IPR035896 | - | |
Bpe04g01426 | 278 | Gene3D | Classic Zinc Finger | 199 | 277 | - | - | |
Bpe04g01426 | 278 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 1 | 278 | - | - | |
Bpe04g01426 | 278 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 251 | 272 | IPR013087 | - | |
Bpe04g01426 | 278 | Pfam | AN1-like Zinc finger | 13 | 52 | IPR000058 | GO:0008270 | |
Bpe04g01426 | 278 | Pfam | AN1-like Zinc finger | 101 | 141 | IPR000058 | GO:0008270 | |
Bpe04g01426 | 278 | ProSiteProfiles | Zinc finger AN1-type profile. | 95 | 145 | IPR000058 | GO:0008270 | |
Bpe04g01426 | 278 | SMART | AN1_Zf_4 | 101 | 142 | IPR000058 | GO:0008270 | |
Bpe04g01426 | 278 | SMART | AN1_Zf_4 | 13 | 52 | IPR000058 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01426 | Bpe-Chr4:20922583 | Bpe14g00205 | Bpe-Chr14:2312703 | 1.13E-34 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21338 | PF01428 | zf-AN1 | 1.60E-07 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g01426 | - | - | qsu:112027911 | 479.174 |