Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g01437 ATGTCTGCCACCGTCGACCAGATGAAGAATGCTATGAAGATCAATGATTGGGTATGCTTACAGGAGAATTTTGATAAGATAAATAAACAGCTTGAGAAAGTCATGCGGGTCACTGAGTCGGAAAAGACCCCCTTCCTTTACATCAAAGCACTTGTCATGCTGGAAGACTTTCTGAGCCAGGCCTTGACAAACAAGGAAGCGAAGAAAAAGATGAGTAGCAGTAATGCTAAGGCCTTGAATGCGATGAAACAGAAGCTGAAGAAGAACAACAAGCAATATGAAGAAGCTATCAACAAGTACAGGGAGAATCCTATTAGTGAGGAGGAAAAAGATGAAGAGGAGACAGAAGACGAGACAGAGACAGATACAGATTTTGATGAAGATCCTACTAAATTGGTAGAGTCGGGATCCGAAGATGAAGAGAATGATGAAGATGTTGATGAAGGCCCAGATGATCGTGATGGGGCTTGGGAGAAGAAAATGAGCAAGAAAGATAAGCTCATGGACAAGCAGTTTAAGAATCCAAGTGAGATTACATGGGATACAGTGAACAAGAAGTTTAAGGAGGTAGTGGCCGCACGTGGTAGAAAAGGAACTGGAAGGTTTGAGCAGGTGGAGCAGCTAACATTCTTGACAAAAGTTGCTAAGACCCCTGCACAAAAGCTTGAAATCCTTTTCAGTGTTGTTGCTGCTCAGTTTGATGTCAATCCAGGGCTTACAGGGCACATGCCCATAAATGTTTGGAAGAAATGTGTGCAGAATATGCTTGTTATCCTTGATATTCTTGTGCACAATCCCAATATTGTGGTGGATGAAGTGGGCGGAATCGATGAGAATGAAAGCCAAAAAGGATCAAACTATAGTGGAAAAATTCGAGTTTGGGGAAATTTGGTGGCTTTCTTAGAAAGAATAGATTCCGAGTTTTTCAAGAGTTTACAGTGCATTGATCCACACACTCGTGAGTATGTTGAGAGACTCAGAGATGAACCACTCCTTTCTGTACTTGCTCAAAATGTGCAGGAATATCTAGAAAGGATTGAAGATTTTAAGGCAGCTGCAAAAGTCTCATTGAGACGGGTTGAGCTTATTTATTACAAACCTCAGGAAGTTTATGATGCCATGAAGAAGTTGGCTGAACAGACGGATAACGAAGATATTGGAGAAGCTGACAGTGAGCCTGTCATTGAAGAAACTAGAGGCCCTTCTCCATTTATTGTGACACCTGAGCTAGTACCTCGAAAACCCACTTTTCCAGAGAGCAGCCGAACTTTGATGGATACTCTGGTGAGTCTGATATACAAGTATGGAGATGAGAGGACCAAAGCACGAGCAATGCTTTGTGATATCTACCACCATGCCCTCTTGGATGAATTTTCTATTGCTCGGGATTTGCTGCTTATGAGTCATTTACAGGACAGTATTCAGCTTATGGACATTTCAACTCAGATTCTTTATAACAGGGGTATGGCTCAACTTGGGCTGTGCGCTTTTAGGGTTGGGCTGATCAGTGAAGGGCATGGGTGCCTTTCAGAATTATATTCAGGTGGAAGGGTAAAAGAGTTATTAGCGCAAGGCGTCTCTCAAAGTCGATATCATGAAAAGACTCCAGAACAGGAAAGGCTGGAACGACGAAGACAGATGCCATACCACATGCACATAAACCTGGAGCTCCTTGAGGCGGTTCATCTCATATGTGCTATGTTGCTGGAAGTCCCCAATTTGGCGTCTAACAACCATGAAGTGAAGCGGAAGGTCATCAGTAAGACTTTCCGGCGATTTCTCGAGGTCAGTGAGAGGCAGACATTCACTGGTCCTCCAGAAAATGTCAGAGATCATGTAATGGCTGCAACTAGGACTCTTAGTAAGGGAGACTTTCAAAGCACATTTGACACGATCTCATCCCTTGATGTGTGGAAACTCCTTCGGAATCGAGAAATCGTTCTTGAGATGCTAAAGGCTAAGATCAAGGAAGAAGCCTTGAGGACTTACCTCTTCACCTACTCTTCCTCTTATGATTCTCTTAGTCAGACCCAGCTCACCAATATGTTTGACCTCACGGAGGTTCAGGTGCACAGTATTGTCAGCAAGATGATGTTCAATGAGGAGCTGCATGCAAGTTGGGATCAGCCTAGTGGCTGTATTGTTTTCCAAAATGTTGAATATTCTAGATTGCATGCCCTTGCATTCCAATTAGTGGATAAGTTGTCAGTCCTGGCAGAAAGCAACGAGAGGGCAATTGAGACCCGTATTGGAGGAGGTGGATTGGATTTACAGTTCCGGCGTAGGGACAGTCAAGACTATGTGGCAGCAGCGGCTTCTGGTAACAGGTGGCAAGAGAACCAGTCTTTCAATCTAGGAAGGCAAAGTGGTAGAAATGCATACGGGGGAGTTAGAGCATTGACATATAGCCGAGGGGGAGTTGGATATTCAAGGGATGGCACTACAGGTCAATTACGCAGCAATCAGGGCTCTCGTTATCAGACTGGTTCTTCAGCGAGGGGATCCCAAATGGAAGCATCGGCTCGCATGGTTAGTCTCAACAAAGGAGTCCGAGGTTAG 2559 44.28 MSATVDQMKNAMKINDWVCLQENFDKINKQLEKVMRVTESEKTPFLYIKALVMLEDFLSQALTNKEAKKKMSSSNAKALNAMKQKLKKNNKQYEEAINKYRENPISEEEKDEEETEDETETDTDFDEDPTKLVESGSEDEENDEDVDEGPDDRDGAWEKKMSKKDKLMDKQFKNPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVAAQFDVNPGLTGHMPINVWKKCVQNMLVILDILVHNPNIVVDEVGGIDENESQKGSNYSGKIRVWGNLVAFLERIDSEFFKSLQCIDPHTREYVERLRDEPLLSVLAQNVQEYLERIEDFKAAAKVSLRRVELIYYKPQEVYDAMKKLAEQTDNEDIGEADSEPVIEETRGPSPFIVTPELVPRKPTFPESSRTLMDTLVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSIQLMDISTQILYNRGMAQLGLCAFRVGLISEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNLASNNHEVKRKVISKTFRRFLEVSERQTFTGPPENVRDHVMAATRTLSKGDFQSTFDTISSLDVWKLLRNREIVLEMLKAKIKEEALRTYLFTYSSSYDSLSQTQLTNMFDLTEVQVHSIVSKMMFNEELHASWDQPSGCIVFQNVEYSRLHALAFQLVDKLSVLAESNERAIETRIGGGGLDLQFRRRDSQDYVAAAASGNRWQENQSFNLGRQSGRNAYGGVRALTYSRGGVGYSRDGTTGQLRSNQGSRYQTGSSARGSQMEASARMVSLNKGVRG 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21006203 21009202 - Bpe016156.1 Bpe04g01437 103246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g01437 852 MobiDBLite consensus disorder prediction 137 151 - -
Bpe04g01437 852 Coils Coil 76 103 - -
Bpe04g01437 852 MobiDBLite consensus disorder prediction 107 125 - -
Bpe04g01437 852 MobiDBLite consensus disorder prediction 152 168 - -
Bpe04g01437 852 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 580 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe04g01437 852 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 1 796 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe04g01437 852 MobiDBLite consensus disorder prediction 808 842 - -
Bpe04g01437 852 Pfam PCI domain 589 717 IPR000717 -
Bpe04g01437 852 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 1 851 - -
Bpe04g01437 852 SMART PINT_4 650 738 IPR000717 -
Bpe04g01437 852 MobiDBLite consensus disorder prediction 98 168 - -
Bpe04g01437 852 SUPERFAMILY Winged helix DNA-binding domain 650 719 IPR036390 -
Bpe04g01437 852 MobiDBLite consensus disorder prediction 808 852 - -
Bpe04g01437 852 ProSiteProfiles PCI domain profile. 549 721 IPR000717 -
Bpe04g01437 852 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 851 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe04g01437 852 Coils Coil 332 352 - -
Bpe04g01437 852 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 650 738 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01173 Bpe04g01437 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01173 Bpe-Chr3:30687936 Bpe04g01437 Bpe-Chr4:21006203 0 dispersed
Bpe03g01169 Bpe-Chr3:30663968 Bpe04g01437 Bpe-Chr4:21006203 1.69E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g01437 K03252 - qsu:112026168 1276.54